Pairwise Alignments

Query, 290 a.a., HDOD domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., putative signal transduction protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  193 bits (491), Expect = 3e-54
 Identities = 101/269 (37%), Positives = 164/269 (60%), Gaps = 2/269 (0%)

Query: 20  MLNRLNELPRLSKVLQELLDMANQPDVDFHQLSKKITLDQILTARLLRMANSAYFGGNGH 79
           +L +++ELPRL K + ELLD+ N  D     +S+K++ D +L+AR+LR+ANSA FG +  
Sbjct: 6   LLQKVDELPRLPKAIAELLDVVNNEDSTVKAVSEKLSHDPVLSARVLRLANSARFGCSRE 65

Query: 80  IATVNDAIIRVGIESVRTLVVASVLSSTFPKIETLDLNDYWTNTFETALIASKIAEQVGL 139
           + T++DA++R+G++++RTLV+AS +    PK+E  DL D+W NTFE A+I  ++A+++G 
Sbjct: 66  VGTIDDAVVRLGMQTLRTLVIASAVVGAVPKVEGFDLADFWGNTFEVAIICQELAKRLGT 125

Query: 140 DKSETFTTGVLHNIGELMIHTLMPTEASLIQQKIAQGMDPLSAQEEVLGISAPRIGAMLA 199
              E FT G+LH+IGEL+I    P  A+ I   +A G D    ++E+LG     IGA+LA
Sbjct: 126 LPEEAFTCGILHSIGELLIVNGDPAVAATISAAVADGADRNLMEKELLGYDNAEIGALLA 185

Query: 200 KEWKFPSEMVDAIKHFDEPREAEISPKLAVAIHFARDINFSWDKLTESKEKSIYLADHPD 259
           + WKF   +V  I+  + P+ AE   KLA  +  A+ I   WDK+ +  E++ +LA    
Sbjct: 186 QSWKFTPHLVKGIQFQNHPKSAEPYSKLAGMLAMAKQIAADWDKIPDD-ERTSWLAQINI 244

Query: 260 SRLLSIS-AAFQSTIDRVRGNGKELATQM 287
              + +        + ++ G G E+  Q+
Sbjct: 245 LAGIKVDLGGLAEKLAKMHGQGMEMGKQL 273