Pairwise Alignments

Query, 290 a.a., HDOD domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 488 a.a., putative signal transduction protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 59.7 bits (143), Expect = 1e-13
 Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 11/203 (5%)

Query: 26  ELPRLSKVLQELLDMANQPDVDFHQLSKKITLDQILTARLLRMANSA-YFGGNGHIATVN 84
           E+P L   ++ L  +A         L + +  D  LT+R+LR+ANSA Y  G   + TV+
Sbjct: 22  EMPALCSTVKTLEKLAKDDVSSMAILGRSVMHDNALTSRILRVANSATYNKGISQVTTVS 81

Query: 85  DAIIRVGIESVRTLVVASVLSSTFPKIETLDLNDY------WTNTFETALIA-SKIAEQV 137
            A + +G +++R + + + L S+  + + L    Y         +F+ A++A   +A   
Sbjct: 82  RAAVVLGFDTIRNICITAKLLSSLLENKNLTPGVYQRLLKLMARSFQAAMLARMMLAAHD 141

Query: 138 GLDKSETFTTGVLHNIGELMIHTLMPTEASLIQQKIAQGMDP---LSAQEEVLGISAPRI 194
              + E F   +L+++GE    ++    A+ + + +    DP   L+   E LG S  ++
Sbjct: 142 EEMQEEAFIAALLYHLGESAFWSMGGPLANELDRALDGVEDPAAVLTQVREHLGTSFSQL 201

Query: 195 GAMLAKEWKFPSEMVDAIKHFDE 217
              LA+ W     ++ ++ + DE
Sbjct: 202 TQGLARSWGLGEVLIKSLNNPDE 224