Pairwise Alignments

Query, 290 a.a., HDOD domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 280 a.a., putative signal transduction protein (RefSeq) from Shewanella loihica PV-4

 Score = 57.0 bits (136), Expect = 5e-13
 Identities = 44/199 (22%), Positives = 91/199 (45%), Gaps = 18/199 (9%)

Query: 27  LPRLSKVLQELLDMANQPDVDFHQLSKKITLDQILTARLLRMANSAYFGGNGHIATVNDA 86
           LP L +V   + ++ ++PD    Q+++ I  D  ++AR++++ANSA +        +N A
Sbjct: 22  LPTLPEVAMRVQEVVSRPDSSPKQVAEIIGQDAAISARMIKVANSAMYSRGIKAENINAA 81

Query: 87  IIRVGIESVRTLVVASVLSSTFPKIETL---DLNDYWTNTFETALIA-------SKIAEQ 136
           + R+G+  ++ +  +  +   F     +    +++ W  + E    A       SK  + 
Sbjct: 82  VTRIGLTQIKAIATSVAMEQLFISTNEMVWEVMDEVWRASIEVTSAACALLLKYSKTHKG 141

Query: 137 VGLDKSETFTTGVLHNIGELMIHTLMPTEASLIQQKIAQGMDPLSAQEEVLGISAPRIGA 196
            GL+        ++HNIG L +  L   EA+     +   ++ L A   V  +  P +G 
Sbjct: 142 CGLNYDTLTLASLVHNIGALPV--LTEAEAN---PHLFTSIEQLRAL--VRKMQGP-LGR 193

Query: 197 MLAKEWKFPSEMVDAIKHF 215
            + K W F  E+ + ++ +
Sbjct: 194 AVLKSWDFSPEVTEVVERW 212