Pairwise Alignments

Query, 290 a.a., HDOD domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., putative signal transduction protein (RefSeq) from Shewanella loihica PV-4

 Score = 64.3 bits (155), Expect = 5e-15
 Identities = 62/263 (23%), Positives = 119/263 (45%), Gaps = 23/263 (8%)

Query: 26  ELPRLSKVLQELLDMANQPDVDFHQLSKKITLDQILTARLLRMANSA-YFGGNGHIATVN 84
           E+P LS  ++ L  +A         L + +  D  LT+R+L++ANSA Y  G  H+ TV+
Sbjct: 17  EMPALSSTVKTLEKLAKDDVSSLAILGRSVMHDNALTSRILKVANSAIYNKGISHVTTVS 76

Query: 85  DAIIRVGIESVRTLVVASVLSSTFPKIETLD------LNDYWTNTFETALIASKIAEQVG 138
            A + +G +++R + + + L S+  + + L       L       F+ A++A  + +   
Sbjct: 77  RAAVVLGFDTIRNICITAKLLSSLLENKGLSEPVYHRLLTLMARAFQAAMLAKMMLKDHD 136

Query: 139 LD-KSETFTTGVLHNIGELMIHTLMPTEASLIQQKIAQ--GMDPLSAQEEVLGISAPRIG 195
            + + E F   +L+++GE    ++       +  ++ Q    D  +   EVLG S  ++ 
Sbjct: 137 EELQEEVFIAALLYHLGESAFWSMGGETTEQLDARLNQVDEKDANNVVREVLGTSFTQLS 196

Query: 196 AMLAKEWKFPSEMVDAIKHFDEPREAEISPKLAVAIHFARDINFSWDKLTESKEKSIYLA 255
             +AK W     +V ++ + +E R  EI      +I+ A  I+    +L  S  K I   
Sbjct: 197 MGIAKNWGLGEVLVKSLSNPNE-RTPEIR-----SIYLANKIS----ELMASDSKDIAEL 246

Query: 256 DHPDSRLLSISAAFQSTIDRVRG 278
           +H   R+   +      +D  +G
Sbjct: 247 NH---RIKQAADMLDLEVDEFKG 266