Pairwise Alignments

Query, 290 a.a., HDOD domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  183 bits (464), Expect = 4e-51
 Identities = 90/265 (33%), Positives = 162/265 (61%), Gaps = 2/265 (0%)

Query: 20  MLNRLNELPRLSKVLQELLDMANQPDVDFHQLSKKITLDQILTARLLRMANSAYFGGNGH 79
           +L+R++ELPRL K + ELL++ N  +     ++ K++ D +++A++LR+AN AY+G +  
Sbjct: 6   LLSRVDELPRLPKAISELLEVVNDDNATVKNIATKVSRDPLISAKVLRLANCAYYGHSRE 65

Query: 80  IATVNDAIIRVGIESVRTLVVASVLSSTFPKIETLDLNDYWTNTFETALIASKIAEQVGL 139
           + ++++A++R+G++++RTLV+AS +    PK   +DL  +W  TFE AL + ++A++ G+
Sbjct: 66  VGSIDEAVVRLGMQTLRTLVLASAVMGAVPKCNGVDLAHFWGQTFEIALYSQEMAKRCGV 125

Query: 140 DKSETFTTGVLHNIGELMIHTLMPTEASLIQQKIAQGMDPLSAQEEVLGISAPRIGAMLA 199
              E FT G+LH IG+L+I  + P +A  I + +AQG D  + + E+LG  +P IGA+LA
Sbjct: 126 QPDEAFTCGILHRIGDLLIAAISPEDAEKITEAVAQGKDKHAFERELLGYDSPDIGALLA 185

Query: 200 KEWKFPSEMVDAIKHFDEPREAEISPKLAVAIHFARDINFSWDKLTESKEKSIYLADHPD 259
           + WKF   +V  I   D P+++    KLA  +  A  +   WD + E  +K+ +L+    
Sbjct: 186 QNWKFTPALVQGILFQDHPKDSNPFSKLAALLCLAHKVLADWDTI-EDDDKTSWLSQLAT 244

Query: 260 SRLLSIS-AAFQSTIDRVRGNGKEL 283
            + L +     +  +  +RG G E+
Sbjct: 245 KKGLKMEMGGLRVKLIELRGVGFEI 269