Pairwise Alignments

Query, 290 a.a., HDOD domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 466 a.a., conserved domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 66.2 bits (160), Expect = 1e-15
 Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 11/204 (5%)

Query: 27  LPRLSKVLQELLDMANQPDVDFHQLSKKITLDQILTARLLRMANSA-YFGGNGHIATVND 85
           +P L   +Q L  +A         L + +  D  LT+R+LR+ANSA Y  G+  I+TV+ 
Sbjct: 1   MPALCSTVQTLEKLAKDDVSSLALLGRSVMHDNALTSRILRVANSAIYHKGSTQISTVSR 60

Query: 86  AIIRVGIESVRTLVVASVLSSTFPKIETLDLNDY------WTNTFETALIASKIAEQVGL 139
           A I +G ++VR + + + L S+  + + L  + Y          F+ A++   +      
Sbjct: 61  AAIVLGFDAVRNICITAQLLSSLLESKNLAPSVYQRLIKLMAKAFQAAMLTRMMLSDYDD 120

Query: 140 D-KSETFTTGVLHNIGELMIHTLMPTEASLIQQKIAQ---GMDPLSAQEEVLGISAPRIG 195
           D + E F   +L +IGE    ++       +  ++ +     D  S   E +G S  ++ 
Sbjct: 121 DIQEEAFIACLLFHIGESAFWSIGGEFTETLDSQLTECETSADERSLIRETIGTSFSQLT 180

Query: 196 AMLAKEWKFPSEMVDAIKHFDEPR 219
             +A+ W     ++ A+ + D+PR
Sbjct: 181 QSIARHWGLGELLIQAVNYPDDPR 204