Pairwise Alignments

Query, 290 a.a., HDOD domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 49.3 bits (116), Expect = 9e-11
 Identities = 39/189 (20%), Positives = 86/189 (45%), Gaps = 23/189 (12%)

Query: 39  DMANQPDVDFHQLSKKITLDQILTARLLRMANSAYFGGNGHIATVNDAIIRVGIESVRTL 98
           ++ ++ D    Q++  I  D  ++AR++++ANSA +       ++N+A+ R+G+  ++++
Sbjct: 5   EVVSRSDASLKQVADVIGQDAAISARIIKVANSALYSRGIPAESINNAVARIGLIQIKSI 64

Query: 99  VVASVLSSTFPKIETL---DLNDYWTNTFETALIASKIAE--------QVGLDKSETFT- 146
             +  +   F     +    +++ W  + +    A  + +        Q+ LD   T T 
Sbjct: 65  ATSVAMEQLFISTNEMVWEVMDEVWRTSIDVTAAACAMLQMYNKRRPSQLNLD---TLTL 121

Query: 147 TGVLHNIGELMIHTLMPTEASLIQQKIAQGMDPLSAQEEVLGISAPRIGAMLAKEWKFPS 206
            G++HNIG L + T       L    I Q       +  V  +  P +G  + K W F  
Sbjct: 122 AGLVHNIGALPVLTEAEAHPELF-TSIEQ------LRSLVRKMQGP-LGRAVLKSWDFAP 173

Query: 207 EMVDAIKHF 215
           E+++ ++ +
Sbjct: 174 EVMEVVERW 182