Pairwise Alignments

Query, 624 a.a., DUF839 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 686 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  381 bits (979), Expect = e-110
 Identities = 254/685 (37%), Positives = 351/685 (51%), Gaps = 90/685 (13%)

Query: 11  FSEMIEAQLSRRHFLA---GSAAVSAGAFLAL-------NPVASAVAAPA-------TSN 53
           F+E+++  LSRR+F+    G  A++A A L L       +PV   V  P        +  
Sbjct: 19  FAEVLDRHLSRRNFVKSGLGLGAMTAFAGLGLAGCGSDSSPVTPPVTTPTPLPPPTQSDI 78

Query: 54  LLNFSAIPVSTEDKVIVPKGYKATPLMSWGDPIFANAPEFDQSGKQDSKAQEKQFGDNTD 113
            L F +IP S  D V +P+GY+A  L  WG P+   A  +   G   S  Q    G N D
Sbjct: 79  TLGFDSIPGSLTDGVSIPQGYRAQVLAPWGTPLNDKAAPWKDDGSNTSDDQANAVGQNHD 138

Query: 114 GMSFFPISE--DRGVLAINNEYTNYEYLFDH-------QGKAMTADDVRKAQAAVGVTIV 164
           GM FFP+++  D G+L IN+EY   + L           G     D+VRK   A GVT+V
Sbjct: 139 GMHFFPLNDAADDGLLCINHEYIEPDALHPTGPSVDPVTGLRTILDEVRKEINAHGVTVV 198

Query: 165 EVVRKNGQWMVDRQGERNRRITAYTPMMMTGPAAGHDLLKTAEDPSGLKVLGTFNNCANG 224
            + R NG W V +    NRR T  T   M+GP A  D L TA  P G +  GT NNC NG
Sbjct: 199 RIKRTNGVWEVIKNDPHNRRFTGATTFDMSGPVAYSDHLVTAFSPDGSQTRGTLNNCGNG 258

Query: 225 ETPWGTYLTCEENFDDFFGADQEGSVDADQKRYGIAAEPSDYQWHK---HD-------AR 274
            TPWGTYLTCEEN+ ++F    +G + A   R G+A + + Y W+    HD       +R
Sbjct: 259 STPWGTYLTCEENWPEYF--VNKGEMSAANARIGVATKDTRYGWNHFAGHDEERADEFSR 316

Query: 275 FDITKN--------PKEPNRFGWVVEIDPHNPNSTPLKRTALGRFKHENAALVINNDGH- 325
           FDIT            E N  G++VEIDP++PN   +KRTALGRF+HE        +G  
Sbjct: 317 FDITPTGISALYDYRNEANGHGYIVEIDPYSPNQRGIKRTALGRFRHEGCTFGKLEEGKP 376

Query: 326 VVVYLGDDERGEHLYKFVSKHRY-QAGNDQQNR-----NLLEEGTLYVAKFDINENELKG 379
           VV Y G D R E+LYK+VS   + +A  +  NR       + +GTLYVA+FD +     G
Sbjct: 377 VVFYSGHDSRFEYLYKYVSDALWSEADANSSNRIATGDKYMNDGTLYVARFDED-----G 431

Query: 380 SGRWMELSFG---KNGLTPENGFKDQAEVLIFARRAATQVGATTMDRPEWVAVHPDKKHV 436
            G W+ L  G    +G T        A++++    AA  VGAT MDRPEW AV P    V
Sbjct: 432 QGEWLPLVPGTVTTDGKTLGEHLGTLADIIVNTAGAADLVGATPMDRPEWCAVDPFTGSV 491

Query: 437 FCTLTNNKNRGKEGQPVGGPNPREKNNYGQIVRWMPAQGDHTSDVFAWDLYLIAGNPTVH 496
           + TLTNN  R  E  P    NPR KN++G I+RW     D     F+WD++ + G+P   
Sbjct: 492 YLTLTNNTRR-TEANPA---NPRLKNSFGHIIRWNEGASD---TEFSWDIF-VFGSPA-- 541

Query: 497 KGTLYAGSENISADNMFNSPDGIGFDTAGRLWIQTDG------NYSNQGDFA-------- 542
            G        ++ +N F SPDG+ FD  G +W+QTD        ++N    A        
Sbjct: 542 NGDSETNLSGLTDENQFASPDGLAFDPRGIMWVQTDNGAKEVTEHTNDQMLAVVPSRLLD 601

Query: 543 GQGNNQMLCGDPITGEVKRFLTGPIACEITGLTFSPDHKTMFVGVQHPG----EEAAPSH 598
            +GN + L  D    E++RF  GP  CE+TG+ FSPD++++F  +QHPG     + A   
Sbjct: 602 AEGNQKPLRADN-QMELRRFFVGPNDCEVTGVAFSPDYQSLFANIQHPGNWPYSDDATQI 660

Query: 599 FPYGGTSKPRSTIMMITREDGGVIG 623
            P G + +PR+  ++I++ DG  +G
Sbjct: 661 TPAGISIRPRAATVVISKVDGTEVG 685