Pairwise Alignments

Query, 624 a.a., DUF839 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 685 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  371 bits (952), Expect = e-107
 Identities = 254/682 (37%), Positives = 347/682 (50%), Gaps = 93/682 (13%)

Query: 11  FSEMIEAQLSRRHFLA---GSAAVSAGAFLAL-----------NPVASAVAAPAT--SNL 54
           F+++++  LSRR+F+    G  A++A A + L            P+      P T  S  
Sbjct: 19  FNQVLDKHLSRRNFVKSGLGLGAMTAFAGMGLVGCGSDNSPAPTPIDPVPPLPPTQSSAK 78

Query: 55  LNFSAIPVSTEDKVIVPKGYKATPLMSWGDPIFANAPEFDQSGKQDSKAQEKQFGDNTDG 114
           L+F+++  S  D V+VP+GY A  L  WG P+ A A  +   G   +  Q    G + DG
Sbjct: 79  LSFTSVAGSRLDAVVVPEGYSAQVLAPWGTPLNAKAAPWKADGSNTADDQANSVGMHHDG 138

Query: 115 MSFFPISE--DRGVLAINNEYT-------NYEYLFDHQGKAMTADDVRKAQAAVGVTIVE 165
           M FFP+++  D G+L IN+EY        N   + +  G     D++RK   A GV++V 
Sbjct: 139 MHFFPLNDAGDDGLLCINHEYIDEIALHPNGPTVDETTGLRTIIDEIRKEINAHGVSVVR 198

Query: 166 VVRKNGQWMVDRQGERNRRITAYTPMMMTGPAAGHDLLKTAEDPSGLKVLGTFNNCANGE 225
           +   N QW V      NRR T  T M + GP A   LL+T   P G +  GT NNC NG 
Sbjct: 199 IKLVNNQWEVVYNDSHNRRFTGATVMDIAGPLAYSPLLETRYSPDGSQARGTLNNCGNGY 258

Query: 226 TPWGTYLTCEENFDDFFGADQEGSVDADQKRYGIAAEPSDYQW-----HKHD-----ARF 275
           TPWGTYLTCEEN+  +F     G++ ADQ R GI+   + Y W     H  +     ARF
Sbjct: 259 TPWGTYLTCEENWPGYFA--NRGTLAADQARIGISKSSTRYGWDDLAGHAEERLDEFARF 316

Query: 276 DITKN--------PKEPNRFGWVVEIDPHNPNSTPLKRTALGRFKHENAALVINNDGH-V 326
           D+T            E N  G++VEIDP+NP+S  +KRTALGRF+HE        +G  V
Sbjct: 317 DVTPKGNSAQDDYRNEANGHGYIVEIDPYNPSSRAIKRTALGRFRHEGCTFGKLTEGKPV 376

Query: 327 VVYLGDDERGEHLYKFVSKHRY--QAGND----QQNRNLLEEGTLYVAKFDINENELKGS 380
           V Y G D + E+LYKFVS   +  Q  N     Q     + EGTLY AKF  NEN   G+
Sbjct: 377 VFYSGHDSQFEYLYKFVSNALWDPQDANSTNRLQMGDKYMNEGTLYAAKF--NEN---GA 431

Query: 381 GRWMEL---SFGKNGLTPENGFKDQAEVLIFARRAATQVGATTMDRPEWVAVHPDKKHVF 437
           G W+ L   S   +G T  + F   AE+++    AA  VGAT MDRPEW AV P     +
Sbjct: 432 GIWLPLILDSQTTDGKTLGDSFASLAEIILNTAGAADLVGATPMDRPEWCAVDPFTGSAY 491

Query: 438 CTLTNNKNRGKEGQPVGGPNPREKNNYGQIVRWMPAQGDHTSDVFAWDLYLIAGNPTVHK 497
            TLTNN  R  E  P    NPR KN++G I+RW   +GD  ++ F WD++ + G+P+   
Sbjct: 492 LTLTNNSKR-TEANPA---NPRLKNSFGHIIRW--DEGDKDTE-FTWDIF-VFGSPS--D 541

Query: 498 GTLYAGSENISADNMFNSPDGIGFDTAGRLWIQTDGNYSNQGDFAGQGNNQMLCGDPIT- 556
           G        ++  N F SPDG+ FD  G LW+QTD   +   + A + N+QML   P T 
Sbjct: 542 GNAETNLSGLTDLNQFASPDGLAFDARGILWVQTD---NGAKEVAEETNDQMLAIVPSTL 598

Query: 557 ---------------GEVKRFLTGPIACEITGLTFSPDHKTMFVGVQHPG----EEAAPS 597
                           E+KRF  GP  CE+TG   SPD+ ++F  +QHPG       A  
Sbjct: 599 VDSANKQASVTAENQMELKRFFVGPNDCEVTGFAISPDYTSVFANIQHPGNWPYSNNAAE 658

Query: 598 HFPYGGTSKPRSTIMMITREDG 619
             P G   +PR+  ++I + DG
Sbjct: 659 ITPAGTVLRPRAATVVIRKLDG 680