Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 535 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  145 bits (365), Expect = 5e-39
 Identities = 105/355 (29%), Positives = 177/355 (49%), Gaps = 27/355 (7%)

Query: 174 IGFLLVTLIAIY---WLLQRTLIAPLNDLKVLCHALASGSCDLSSRINFRKDNELGQLAN 230
           I  LL T +A+    W L + ++ PLN  K++ +A A    DL   +  +  +ELGQL  
Sbjct: 187 IATLLATCVALALLSWSLLKAVLTPLN--KIILNAQAMSQGDLQRSMGAQSKDELGQLQG 244

Query: 231 AIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQSEISNSVAIGHQSQD 290
            I+     +    A I+ +    +D  H   + +G     I +   + + S      S +
Sbjct: 245 VIEQMQTNLRQMIATIRGQ----SDELHGTSRHLGDTARQIVSSADQQAQSATSMAASME 300

Query: 291 SIKAVTESIYAASESLKQAVTSSE---DSKAQLREAQTQNQ-QLVEKAEITTKTATELNT 346
            + A    I+  ++S +     SE    S  Q+     +   ++ E    ++   T L+ 
Sbjct: 301 QMMANISQIHQHADSARTISAQSEHLASSGGQVILGVVEGMNRIAEVVNQSSSKITALDA 360

Query: 347 QVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVRHLAEKTSASTNQ 406
             E +  I+Q+I+SIAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA +T+ ST +
Sbjct: 361 SSEDIHSIIQVIKSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAARTTQSTQE 420

Query: 407 VETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDKAIIDVNQANSTNQNAVHD 466
           +  ++ ++   +R+ +  M+        CV+ ++ G NL  +A + +++  +    A H 
Sbjct: 421 ITAMIERIQSSARDAVANMQA-------CVSRVDEGVNLAQQAGVSISEIRT---GARHA 470

Query: 467 SEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKELLRSASQTRSNLKQLSH 521
           +E    + + + EQ +  D  A+ +     +I+E S+E  RS         QL++
Sbjct: 471 AEVVEEISQTIAEQSKASDEMAQRV----ESIAEQSRENTRSIHNLTQTADQLNN 521