Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  130 bits (328), Expect = 1e-34
 Identities = 101/372 (27%), Positives = 185/372 (49%), Gaps = 22/372 (5%)

Query: 158 VQQVASQLRNQAFM--LSIGFLLVTLIAIYWLLQRTLIAPLNDLKVLCHALASGSCDLSS 215
           VQ+ A  LR +  +    +GF ++ L+A+  +L R ++  L  L    + LA+G  DL+ 
Sbjct: 257 VQEAAGTLRWRIGLGLALVGFGVLVLLAV--VLGRRVVNRLKLLIAAMNDLAAGEGDLTK 314

Query: 216 RINFRKDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHN-- 273
           R+     +E+G +A+A++ F+ K++    PI   + E  DV+ +   +IG +   + N  
Sbjct: 315 RVQINSKDEIGDMASAVNRFVDKLQ----PI---VREAGDVAQRTGVEIGAM--TLRNSG 365

Query: 274 -------QQSEISNSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQ 326
                  Q+ E++ S+    Q  D  ++ ++++ AA + + +   +++++     +  + 
Sbjct: 366 ADAAAGMQRDEVAESLRALSQMADEAQSESQAMQAALQQVVEIRQATDENTRTSAKVGSL 425

Query: 327 NQQLVEKAEITTKTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGF 386
            + L  + +   K    L  Q E++  +L +I  IAEQTNLLALNAAIEAARAGE GRGF
Sbjct: 426 IEALAGQVDTGAKVIERLAQQSEQIEVVLTVIHGIAEQTNLLALNAAIEAARAGETGRGF 485

Query: 387 AVVADEVRHLAEKTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLV 446
           AVVADEVR LA KT +ST  ++  +  L   +R  +  + ++   A   +  +   + L 
Sbjct: 486 AVVADEVRALASKTQSSTGDIQAHIVALQQGAREAVAAIGQAGRQASEGLVVLRDSARLQ 545

Query: 447 DKAIIDVNQANSTNQNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKELL 506
                 V Q ++    A   +  Q +  + +  ++  +   A +        +   K L 
Sbjct: 546 QSVQASVEQVHAAIGLATQAAAHQAQGAQAVRGRVETIHAQAEKAAQAVVETTASGKVLD 605

Query: 507 RSASQTRSNLKQ 518
             A+Q +++L Q
Sbjct: 606 SLAAQLKASLGQ 617