Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  150 bits (378), Expect = 1e-40
 Identities = 102/356 (28%), Positives = 178/356 (50%), Gaps = 6/356 (1%)

Query: 166 RNQAFMLSIGFLLVTLIAIYWLLQRTLIAPLNDLK-VLCHALASGSCDLSSRINFRKDNE 224
           R   +  ++  L++ ++    LL R L++ LN LK V+ H   +G  DLS+R+    ++E
Sbjct: 139 RFSQYAAAVFVLMLAMLGASQLLIRFLLSQLNTLKDVMLHVEKTG--DLSARVPLACEDE 196

Query: 225 LGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQSEISNSVAI 284
           +GQ+A A +   A  +     +     ++   + ++   +  + H +  QQSE   +   
Sbjct: 197 VGQMAAAFNAMQAGYQRVVDTVASTARQLDSGAARLASSMNDVRHGMLGQQSETDQAATA 256

Query: 285 GHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEKAEITTKTATEL 344
            ++   ++  + +   A  +  K A T + +    +   Q     L    + T +    L
Sbjct: 257 INEMSATVYHIAQHAGATRDLSKTADTLAGNGHDVVARVQQSITGLSSGVQQTAEMIQRL 316

Query: 345 NTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVRHLAEKTSAST 404
               +K+  ++ +I SIAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA++   ST
Sbjct: 317 AEDSQKINGVVSVIHSIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRNLAKRVQTST 376

Query: 405 NQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDKAIIDVNQANSTNQNAV 464
           +++ T+++ L   +R+ + +M+ES + A +CV       + + +    V Q   +N    
Sbjct: 377 DEITTMVSALQAGTRDAVDFMQESSLKADDCVQQAREAGDALAQITAAVAQMRESNTQIA 436

Query: 465 HDSEQQNRLVEQL---LEQLRLLDNHARELLTDSATISEHSKELLRSASQTRSNLK 517
             +EQQ+ + E++   +  +R +  +      DSAT S     L    S+    LK
Sbjct: 437 VAAEQQSHVAEEMNRAVVSIRDVTENTVRQTVDSATTSHELATLAGELSKAIGQLK 492