Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 612 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  147 bits (371), Expect = 1e-39
 Identities = 101/342 (29%), Positives = 171/342 (50%), Gaps = 9/342 (2%)

Query: 172 LSIGFLLVTLIAIYWLLQRTLIAPLNDLKVLCHALASGSCDLSSRINFRKDNELGQLANA 231
           L +G L V    +     ++++ P++ +     ++A G  DL   + F+ ++E  +LA  
Sbjct: 263 LIVGGLTVIFALVAVAFSKSIVKPISQVSTGLQSIAQGEGDLRRELEFQGNDETAELAGW 322

Query: 232 IDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQSEISNSVAIG-HQSQD 290
            + F++ +      I      + + S +V  ++    +    +Q E    V+   ++   
Sbjct: 323 FNKFLSAIRQLIQHIGAASSNLQNAS-RVNSEVANNMNEAAGRQREAVELVSTAFNEMVA 381

Query: 291 SIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEKAEITTKTATELNTQVEK 350
           +   V  S   A+ES +       + K Q+        +L  +   ++++ TEL      
Sbjct: 382 TANEVARSCSGAAESAENGHRRVAEGKQQIEITTDNVNRLGRRLTESSQSMTELEAGSRS 441

Query: 351 VTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVRHLAEKTSASTNQVETL 410
           +  IL  IR+IAEQTNLLALNAAIEAARAG+ GRGFAVVADEVR LA++TS ST ++E L
Sbjct: 442 INQILGTIRAIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRALAKRTSDSTGEIEQL 501

Query: 411 LTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDKAIIDVNQANSTNQNAVHDSEQQ 470
           L  L   ++ ++G M   L  +   V++IES  +  +   + VN+    N      +E+Q
Sbjct: 502 LGALGSKTQEVMGKMGSCLELSHASVSSIESTRDSFEGIQLSVNEIRDQNLQISAAAEEQ 561

Query: 471 -------NRLVEQLLEQLRLLDNHARELLTDSATISEHSKEL 505
                  NR ++Q+ ++ RL+++ A     DS  +S  S EL
Sbjct: 562 HSVAEEINRHIQQIYDEARLVESLANSAQDDSGKLSSLSDEL 603