Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

 Score =  148 bits (373), Expect = 6e-40
 Identities = 95/324 (29%), Positives = 164/324 (50%), Gaps = 4/324 (1%)

Query: 158 VQQVASQLRNQAFMLSI----GFLLVTLIAIYWLLQRTLIAPLNDLKVLCHALASGSCDL 213
           V Q   + R +  +LSI      +L+ + A+   +  T++ PL+ +K     +A+G  DL
Sbjct: 193 VVQTEVRERMEGVLLSIVGVAAVVLLVIAAVGLFVANTILRPLHLMKANLDDIAAGEGDL 252

Query: 214 SSRINFRKDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHN 273
           + R+     +ELG+LA + + F+ K+ S    I +   ++T + ++V  Q  R +  +  
Sbjct: 253 TRRLAITSQDELGELAGSFNRFVDKIHSLVRQITEMTSQLTGLVNQVSDQAQRSDQAMER 312

Query: 274 QQSEISNSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEK 333
           Q+ E        ++   + + V +S   A+ + +Q     + +K  +  + +Q   LV+ 
Sbjct: 313 QRHETDQVATAINEMSAAAQEVAKSAQGAAVAAQQTDEEGQAAKRVVAGSISQIHALVKD 372

Query: 334 AEITTKTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEV 393
              +  +   L   V  +  +L +IRSIA+QTNLLALNAAIEAARAGE GRGFAVVADEV
Sbjct: 373 IRSSGVSLDSLQQDVSSIVSVLGVIRSIADQTNLLALNAAIEAARAGEAGRGFAVVADEV 432

Query: 394 RHLAEKTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDKAIIDV 453
           R LA +T  ST +++ ++ +L   +++ +  M  S  A     A        +D     +
Sbjct: 433 RALASRTQQSTQEIQGMIDRLQAGTQSAVDAMRRSSEAGDGTSAQANQAGASLDTMAQLI 492

Query: 454 NQANSTNQNAVHDSEQQNRLVEQL 477
              NS N      +E+Q  + E++
Sbjct: 493 GTINSMNAQIASAAEEQTAVAEEI 516