Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  154 bits (390), Expect = 6e-42
 Identities = 100/366 (27%), Positives = 179/366 (48%), Gaps = 6/366 (1%)

Query: 155 FDQVQQVASQLRN-QAFMLSIGFLLVTLIAIY-----WLLQRTLIAPLNDLKVLCHALAS 208
           +D  QQ   + R   A    +G +L  ++ I      WL+ R+++  +  +     ++A 
Sbjct: 168 YDSFQQTLVETREANANTTRLGIILSLVLVILVSLGAWLVIRSVMVNIRGVIASLQSIAR 227

Query: 209 GSCDLSSRINFRKDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLE 268
           G  DL+ R+N   ++E+G +    + F+ K++ST   I D    +  VS ++ +     E
Sbjct: 228 GDGDLTQRVNVESNDEIGAMIELFNSFLDKLQSTIRQIIDAATPLGQVSKELYKLTQGSE 287

Query: 269 HNIHNQQSEISNSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQ 328
            N  +QQ    +          SI+ V +    AS+    A   +  ++  +    T   
Sbjct: 288 ENAKSQQHHTDSITRDILTMTGSIQEVAQRSQQASDEANSAARQAATAREHVGSLSTGIS 347

Query: 329 QLVEKAEITTKTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAV 388
            L +      K   +L  + ++V  +L +IRSIAEQTNLLALNAAIEAARAGE GRGFAV
Sbjct: 348 DLGDSVMGAVKAMEQLEEETQEVGSVLTVIRSIAEQTNLLALNAAIEAARAGEQGRGFAV 407

Query: 389 VADEVRHLAEKTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDK 448
           VADEVR+LA+KT+AST +++ ++ +L   +  ++  M  +   +R  +      + L++ 
Sbjct: 408 VADEVRNLAQKTAASTAEIQQIIQRLQNSANTVLNVMTSNGEKSRASIQRSIEATQLLET 467

Query: 449 AIIDVNQANSTNQNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKELLRS 508
               VNQ +  N      +++Q  L   + ++ ++L   A+     +   +   ++L+ +
Sbjct: 468 IARTVNQIDELNAGIAQFTQEQIGLSSSIQQETQVLQQDAQATANGAEATARLGEQLVST 527

Query: 509 ASQTRS 514
               R+
Sbjct: 528 GDHLRA 533