Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  142 bits (358), Expect = 4e-38
 Identities = 95/350 (27%), Positives = 175/350 (50%), Gaps = 15/350 (4%)

Query: 169 AFMLSIGFLLVTLIAIYWLLQRTLIAPLNDLKVLCHALASGSCDLSSRINFRKDNELGQL 228
           A + ++G +L+ L     +L R L+ PL D+      +A G  DL+ R+  +  +E G+L
Sbjct: 281 AALTAVGVILLLL----GMLMRVLMRPLTDMGRAMANIAEGEGDLTRRLAVQSKDEFGEL 336

Query: 229 ANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQSEISNSVAIGHQS 288
           A+A + F+ ++ ++   +     +V +V+ +V         N   Q S  ++  A  ++ 
Sbjct: 337 ASAFNRFVERIHTSIREVSSATQQVNEVAARVLAASNSSMANSDEQASRTNSVAAAINEL 396

Query: 289 QDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEKAEITTKTATELNTQV 348
             + + +  +   AS+    A   +ED +  + +     ++L  K   +      LN + 
Sbjct: 397 GAAAQEIARNAADASQQASGARHQAEDGRQVVEQNIAAMRELSAKISASCAQIEALNAKT 456

Query: 349 EKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVRHLAEKTSASTNQVE 408
             +  IL++I+ I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA +T +S  +++
Sbjct: 457 VDIGQILEVIKGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQSSAQEIQ 516

Query: 409 TLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDKAIIDVNQANSTNQNAVHDSE 468
            ++ QL   +   +  M ES   + + V+  +     + +    + + +  NQ+    +E
Sbjct: 517 QMIEQLQVGAGASVQTMTESQRQSESSVSIADRAGERLGEVTQRIGEIDGMNQSVATATE 576

Query: 469 QQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKELLRSASQTRSNLKQ 518
           +Q  ++E L              +T+  T+++   E L+S  +   +L Q
Sbjct: 577 EQTAVIESLNMD-----------ITEINTLNQQGVENLQSTLRACGDLDQ 615