Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  178 bits (451), Expect = 7e-49
 Identities = 112/354 (31%), Positives = 182/354 (51%), Gaps = 3/354 (0%)

Query: 167 NQAFMLSIGFLLVT--LIAIYWLLQRTLIAPLNDLKVLCHALASGSCDLSSRINFRKDNE 224
           N A ML IG L+    L+AI WL+ R +  PL D+ V+   ++ G  DL+ R+N    NE
Sbjct: 354 NLAAMLVIGMLIAFAGLLAI-WLISRRITRPLRDMVVMLDNISQGEGDLTQRLNIDSRNE 412

Query: 225 LGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQSEISNSVAI 284
           LGQ+A   + F+A+++   + +   + +V+D S        R +  +  Q +EI      
Sbjct: 413 LGQIAAGFNAFLARLQGMISEVVSSVQKVSDASEHTADIAIRTDKGVQTQLAEIELVATA 472

Query: 285 GHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEKAEITTKTATEL 344
            H+   + + V  +   A+E+   A  ++   +  +++      +L  +          L
Sbjct: 473 VHEMTATAQDVARNATQAAEAANNADRAANQGRHIVQDTGATIAELASEIGRAVDVVQTL 532

Query: 345 NTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVRHLAEKTSAST 404
               E +  IL  IRSIAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA+KT  +T
Sbjct: 533 ARDSENIDAILVTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQAT 592

Query: 405 NQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDKAIIDVNQANSTNQNAV 464
            +++ ++ QL G +R+++  ME+S    R  V   ++ +  +      V+  N  N    
Sbjct: 593 GEIQQMIQQLQGGTRDVVQVMEQSQNRTRRSVEQADAAAEALQAITQAVSLINDMNNQIA 652

Query: 465 HDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKELLRSASQTRSNLKQ 518
             +E+Q+ + E +   +  +   A+++   +   S+ S  L R A Q R  + Q
Sbjct: 653 SAAEEQSAVAEDINRNVTNIGQVAQQVAAGADEASQASAGLTRLAEQQRRLINQ 706