Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  142 bits (359), Expect = 3e-38
 Identities = 100/358 (27%), Positives = 177/358 (49%), Gaps = 14/358 (3%)

Query: 164 QLRNQAFMLSIGFLLVTLIAIYWLLQRTLIAPLNDLKVLCHALASGSCDLSSRINFRKDN 223
           + RN A + ++   +V +I +  +L   L+ PLN +    H +A+G  DL+ R+     +
Sbjct: 273 EFRNSAIVATV-IAVVLIILLLGMLLSVLLRPLNLMGRAMHDIAAGEGDLTKRLVIESQD 331

Query: 224 ELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQSEISNSVA 283
           E G L N  + F+ ++  +   +    V++ +V+ +V         N  +QQS  +NSVA
Sbjct: 332 EFGHLGNGFNLFVERIHDSMREVASSTVQLNEVALRVLNASNSSMLN-SDQQSHRTNSVA 390

Query: 284 IG-HQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEKAEITTKTAT 342
              ++   + + + ++   AS     A T + D +  + +      +L ++    +    
Sbjct: 391 AAINELGAATQEIAQNAARASGHSSDARTLASDGQDVVGQNIEAMSRLSKRISSASGQIE 450

Query: 343 ELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVRHLAEKTSA 402
            LNT+   +  IL +I  I++QTNLLALNAAIEAARAGE GRGFAVVADEVR LA +T  
Sbjct: 451 TLNTKTANIGQILDVITGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAHRTQE 510

Query: 403 STNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDKAIIDVNQANSTNQN 462
           S +QV+ ++ QL   +R  +  M +S   +   V         ++     + + +  NQ+
Sbjct: 511 SASQVQEMIEQLQSGAREAVSIMNDSQRESVETVGIANKAVASLEHVTERIGEIDGMNQS 570

Query: 463 AVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKELLRSASQTRSNLKQLS 520
               +E+Q  +VE +              +T+  T+++   E L +  +  ++L+Q S
Sbjct: 571 VAAATEEQTAVVEAINVD-----------ITEINTLNQQGVENLNATLRACTDLEQQS 617