Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  151 bits (382), Expect = 5e-41
 Identities = 106/364 (29%), Positives = 178/364 (48%), Gaps = 19/364 (5%)

Query: 160 QVASQLRNQA-FMLSIGFLLVTLIAIYW--LLQRTLIAPLNDLKVLCHALASGSCDLSSR 216
           + A +L++ + FML+ G ++  ++AI    L+ R +  PL     +   +ASG  DL+  
Sbjct: 180 EAADRLQSTSVFMLTAGIVIAFVVAIMLGILITRMITRPLRSAIEVAQRIASG--DLTQS 237

Query: 217 INFRKDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQS 276
           ++  + +E G L NAI      ++ T   I     ++   + ++          +  Q  
Sbjct: 238 VSSTRGDEAGHLLNAIGTMQGNLKRTIQEISSASDQLASAAEELGAVTEESTRGLTRQND 297

Query: 277 EISNSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEKAEI 336
           EI  +    ++   +++ V  +  + SE  K   T + + + Q+         +V +   
Sbjct: 298 EIQQAATAVNEMTAAVEEVARNAVSTSEESKSLATDAANGRGQVDNTVKGIGTMVSEITE 357

Query: 337 TTKTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVRHL 396
           +T + T L   V  ++ +L++IRSIAEQTNLLALNAAIEAARAGE GRGFAVVADEVR L
Sbjct: 358 STGSVTTLAGHVRDISKVLEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRAL 417

Query: 397 AEKTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDKAIIDVNQA 456
           A +T AST ++E ++  +   +   +  M +SL  A N     +   + ++K    V   
Sbjct: 418 AHRTQASTVEIEGMIGTVQSGADGAVAAMSKSLATATNTQELAQRAGSALEKITSGVGMI 477

Query: 457 NSTNQNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKELLRSASQTRSNL 516
           N  N      SE+Q ++              ARE+  +   I E S +    A+QT ++ 
Sbjct: 478 NERNMVIASASEEQAQV--------------AREVDRNLVNIQELSAQSAAGANQTSASS 523

Query: 517 KQLS 520
           ++LS
Sbjct: 524 QELS 527