Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  144 bits (363), Expect = 1e-38
 Identities = 99/341 (29%), Positives = 163/341 (47%), Gaps = 6/341 (1%)

Query: 174 IGFLLVTLIAIYWLL----QRTLIAPLNDLKVLCHALASGSCDLSSRINFRKDNELGQLA 229
           IG +   L  ++ ++     R ++ P++ +      +A G  DL+  +  R  +E  QLA
Sbjct: 295 IGIIAAVLAVVFAIVGASFARVIVRPIHSVSSGLEGIAGGEGDLTQNLAVRGKDETAQLA 354

Query: 230 NAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQSEISNSVAIGHQSQ 289
              + F+  + S    I     ++ + SH   +    +      Q+  +       H+  
Sbjct: 355 GWFNKFLTAIRSLIQHIGQAAGKILEASHSSTRVSNDMAEAAGRQREAVDMVSTAFHEMV 414

Query: 290 DSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEKAEITTKTATELNTQVE 349
            +   V  S   A++S       + + + Q+ +A     QL E+   + K  T+L     
Sbjct: 415 ATSNEVARSCSQAADSADNGQQQAREGQRQIDDAVRSVDQLSEELTRSAKDMTQLEKDSA 474

Query: 350 KVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVRHLAEKTSASTNQVET 409
            +  IL  IRSIAEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA++TS ST ++++
Sbjct: 475 GIQSILNTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAKRTSDSTAEIDS 534

Query: 410 LLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDKAIIDVNQANSTNQNAVHDSEQ 469
           LL  L+  + ++   M  SL  ++  V  I    +   +    V+     N      +E+
Sbjct: 535 LLGNLAKRTASVAQQMHASLDVSQQSVTKIGQARSSFGQIRESVDVIRDMNTQIATAAEE 594

Query: 470 QNRLVEQLLEQLRLLDNHAREL--LTDSATISEHSKELLRS 508
           Q+++ E +   +  +   A+ +  L+DSA     S E+L S
Sbjct: 595 QHQVAEDINRHISQIHGDAQLIAQLSDSARADSRSLEMLSS 635