Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  147 bits (370), Expect = 1e-39
 Identities = 96/359 (26%), Positives = 175/359 (48%), Gaps = 3/359 (0%)

Query: 156 DQVQQVASQLRNQAFMLSIGFLLVTLIAIYWLLQRTLIAPLNDLKVLCHALASGSCDLSS 215
           D+  Q ++Q R      ++  +++ +IA   ++ R +  PL +   +   +ASG  DL+ 
Sbjct: 278 DRRDQESAQARTTQITCTLLAIILGIIAAV-IITRQITRPLRETLAVVDRIASG--DLTQ 334

Query: 216 RINFRKDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQ 275
            +   + +ELG L   I      +      I+D +V++   + ++     +    +++Q+
Sbjct: 335 TLAVTRSDELGVLQQGIQRMGTTLRELIGGIRDSVVQIASAAEELSAVTEQTSAGVNSQK 394

Query: 276 SEISNSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEKAE 335
            E        H+   ++  V  +   AS++   A   + D    + EA  Q ++L  +  
Sbjct: 395 VETDQVATAMHEMSATVAEVARNAEQASQAASNADREARDGDKVVGEAIAQIERLANEVG 454

Query: 336 ITTKTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVRH 395
            +    TEL  + +K+  ++ +I+++AEQTNLLALNAAIEAARAGE GRGFAVVADEVR 
Sbjct: 455 RSVDAMTELEQESDKIGKVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRG 514

Query: 396 LAEKTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDKAIIDVNQ 455
           LA++T  ST ++ETL+  L   +R +   M  S     + V         +      V+ 
Sbjct: 515 LAQRTQQSTVEIETLVAALQSGTRQVSSIMLNSRELTVSSVTLSRQAGTSLGSITQTVSS 574

Query: 456 ANSTNQNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKELLRSASQTRS 514
             + NQ     +E+Q+ + E++   +  + + + +  + S   +  S EL R   Q ++
Sbjct: 575 IQAMNQQIAAAAEEQSAVAEEISRSIVNVRDVSEQTASASEETAASSVELARLGGQLQT 633