Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 658 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  134 bits (336), Expect = 1e-35
 Identities = 91/335 (27%), Positives = 167/335 (49%), Gaps = 9/335 (2%)

Query: 172 LSIGFLLVTLIAIY---WLLQRTLIAPLNDLKVLCHALASGSCDLSSRINFRKDNELGQL 228
           L+IG LL  LIA+    WLL R+ + PL++L     AL +G  DLS R+N   ++E+GQL
Sbjct: 310 LAIGSLLAMLIAVISAIWLL-RSKLRPLSELVRQADALGAG--DLSVRLNVTSNDEIGQL 366

Query: 229 ANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQSEISNSVAIGHQS 288
           + + +     + S  + I+    EV+  ++ +    G     +  Q  EI++      + 
Sbjct: 367 SGSFNKMSEALSSMVSHIRTAAQEVSTRANVLSGLSGGAFEGMEQQSGEITSMAGAVEEF 426

Query: 289 QDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEKAEITTKTATELNTQV 348
             +   + +++       ++    +   +  + EA +  QQ+      T K    L  + 
Sbjct: 427 SATSMNIADNMGNTERLAQENAQQTRIGRTSMEEASSSLQQIATSLSSTAKVIDTLGQRS 486

Query: 349 EKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVRHLAEKTSASTNQVE 408
           +++  I+ +I SIA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA +T  +T+++ 
Sbjct: 487 QEIGSIVGVITSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTREATDEIS 546

Query: 409 TLLTQLSGYSRNLIGYMEES---LVAARNCVAAIESGSNLVDKAIIDVNQANSTNQNAVH 465
            ++  +   + N I  M++    +    +  A + S    +D+         +    A  
Sbjct: 547 GMIASIQQETGNAISTMQQGNTLMQEGLSLNAKVASALAQIDEQSRSAGHQFAAITTATQ 606

Query: 466 DSEQQNRLVEQLLEQLRLLDNHARELLTDSATISE 500
           +      ++   L+ + + ++  R+++++ A  ++
Sbjct: 607 EQSSTATMLSSNLQSIAMANSEQRQVMSNLAITAQ 641