Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  144 bits (362), Expect = 1e-38
 Identities = 92/348 (26%), Positives = 176/348 (50%), Gaps = 2/348 (0%)

Query: 160 QVASQLRNQAFMLSIGFLLVTL--IAIYWLLQRTLIAPLNDLKVLCHALASGSCDLSSRI 217
           +V + L   A  +    LL+ L  + +   +  ++  P+  +  +   +  G  DL  R+
Sbjct: 273 EVFALLDEAALKILFSTLLIALAFVVLSGFVASSVSKPIAAVARMFRDIGEGEGDLRQRL 332

Query: 218 NFRKDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQSE 277
             + ++EL QLA+  + FI+K++ +   +     ++   +  V +Q  +   +  +Q+  
Sbjct: 333 PVQGEDELAQLASGFNSFISKIQDSVIEVAQTSEQLGKSAIDVSRQAQQTLEDSQDQKDR 392

Query: 278 ISNSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEKAEIT 337
               V   ++   ++  +  +   A+E+ K A  +S   +  + +A+    QL +     
Sbjct: 393 TMQVVTAINEMGATVNEIAANAAQAAEAAKDADRASGSGQKVVTQARDTINQLSKDVSQV 452

Query: 338 TKTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVRHLA 397
            +    L T  + +  IL +IR+I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA
Sbjct: 453 GEVIESLATHTKSIGSILDVIRAISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLA 512

Query: 398 EKTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDKAIIDVNQAN 457
            +T+AST++V+ ++ +L   S   +  M +S   ++  V+A++  SN +      +   +
Sbjct: 513 SRTAASTDEVQVMIDKLQSESARAVNAMSQSRSRSQEGVSAVDEASNTLSGISDQIGLIS 572

Query: 458 STNQNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKEL 505
             N      +E+Q+ +VE +   +  +++  +     +   +  SK+L
Sbjct: 573 DMNIQVAAATEEQSTVVEDINRNVTEINDITQRTAATAQAAARASKDL 620