Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  155 bits (393), Expect = 4e-42
 Identities = 113/365 (30%), Positives = 180/365 (49%), Gaps = 7/365 (1%)

Query: 158 VQQVASQLRNQAFMLSIGFLLVTLIAIYWLLQRTLIAPLNDLKVLCHALASGSCDLSSRI 217
           +Q +A+ L     +L IG   V +I I  L  R+++AP+  ++     LAS   DL+  +
Sbjct: 344 MQAMAASLGRFVLLLGIGIAAVAVILIA-LFIRSVVAPIQQIQQRVSQLASAEGDLTQSL 402

Query: 218 NFRKDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQSE 277
              +  EL  L N  + FI K+    + +K    E  + S    +     + +++ Q SE
Sbjct: 403 KVDEHAELIALGNGFNAFIGKLHGLISELKKVATESRNESQATARIAEETKQSVNRQYSE 462

Query: 278 ISNSV-AIGHQSQDSIKAVTESIYAASESLKQA--VTSSEDSKAQLREAQTQNQQLVEKA 334
           I + V A+   S  + +    S   ASES   A  V  S+DS  Q     +   +   +A
Sbjct: 463 IESVVTAVNEMSHTAHEVAKASEQTASESAAMASQVKVSQDSLTQAVSLVSTMSKESLQA 522

Query: 335 EITTKTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVR 394
           +I      E +T + K   IL++I +IA QTNLLALNAAIEAARAGE GRGFAVVADEVR
Sbjct: 523 KIAVGKVAESSTNISK---ILEVISAIAAQTNLLALNAAIEAARAGEQGRGFAVVADEVR 579

Query: 395 HLAEKTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDKAIIDVN 454
            LA KT AST+ +  L+  L    +   G +++ +  A   VA  E     +   +  +N
Sbjct: 580 SLASKTQASTDDISRLIDALEQEVKGASGIIDKGVGLAEQAVAQTEQAFEALSVMVAGIN 639

Query: 455 QANSTNQNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKELLRSASQTRS 514
           + ++        +E+Q+ + E++   +  + + A EL+  +    E S+ L +   +  S
Sbjct: 640 EISNQVTQIATAAEEQSAVTEEVSRNITGISDSAAELMDLAGKARESSESLAKLVGRQES 699

Query: 515 NLKQL 519
            L +L
Sbjct: 700 QLAKL 704