Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  146 bits (369), Expect = 2e-39
 Identities = 99/386 (25%), Positives = 198/386 (51%), Gaps = 5/386 (1%)

Query: 133 IIVPLKAGKNADLVGYLV--TEWGFDQVQQVASQLRNQAFMLSIGFLLVTLIAIYWLLQR 190
           +I P+ +GK A+LV   +   +   +QV+ + S        L++  +L+T     W+  R
Sbjct: 154 VIDPI-SGKVAELVTLQIHIADLEREQVETLHSSSLKWFIGLAVFAVLITSFFGVWV-NR 211

Query: 191 TLIAPLNDLKVLCHALASGSCDLSSRINFRKDNELGQLANAIDDFIAKVESTFAPIKDRI 250
            ++ P+ +++     +   S D++      +D+ELG +A  ++  +  ++     I +  
Sbjct: 212 GVMTPVTEIRQKLRQIREKS-DMTVSFTVFRDDELGHIAKDLNGVVNHLKGILKNIAEAA 270

Query: 251 VEVTDVSHKVEQQIGRLEHNIHNQQSEISNSVAIGHQSQDSIKAVTESIYAASESLKQAV 310
             + D + ++ +   +    +  QQSE   +    ++   ++  V +S  +A+ES + A 
Sbjct: 271 STLGDSADELNEFTRQANDRMFKQQSETEQTATAMNEMTAAVAEVAQSSNSAAESARNAD 330

Query: 311 TSSEDSKAQLREAQTQNQQLVEKAEITTKTATELNTQVEKVTDILQMIRSIAEQTNLLAL 370
            S+    + ++++ +    L  + + T     EL T+ + +  +L +I+SIAEQTNLLAL
Sbjct: 331 ESAARGNSIVQQSISSMSVLASQIQGTAAVIGELATESQNIGRVLDVIKSIAEQTNLLAL 390

Query: 371 NAAIEAARAGENGRGFAVVADEVRHLAEKTSASTNQVETLLTQLSGYSRNLIGYMEESLV 430
           NAAIEAARAGE GRGFAVVADEVR LA++TS ST ++E+++  L    ++ +  ME+ + 
Sbjct: 391 NAAIEAARAGEQGRGFAVVADEVRTLAQRTSESTREIESMIESLQQGVKSAVNSMEQGIA 450

Query: 431 AARNCVAAIESGSNLVDKAIIDVNQANSTNQNAVHDSEQQNRLVEQLLEQLRLLDNHARE 490
              N   +  +  + +   +  V+     N +    +++Q+ + E + + +  + + A+E
Sbjct: 451 QVDNANESTNAAGSALQDIVASVDSITQLNTHIATAADEQSCVAESINQSIIAISDIAQE 510

Query: 491 LLTDSATISEHSKELLRSASQTRSNL 516
               +  +SE   +L + A   R+ +
Sbjct: 511 STQAANDLSEAVHQLAQLAGHMRTQV 536