Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  147 bits (372), Expect = 8e-40
 Identities = 103/371 (27%), Positives = 184/371 (49%), Gaps = 13/371 (3%)

Query: 151 TEWGFD-----QVQQVASQLRNQAFMLSIGFLLV--TLIAIYWLLQRTLIAPLNDLKVLC 203
           +EWG+       V  +A+Q +   +   + FLLV   ++A+  ++ R++  PL    +  
Sbjct: 177 SEWGWIVGTGIYVDDIAAQKQEFTWQYLLVFLLVWGPVMALLLMISRSVTEPLQRTLMAF 236

Query: 204 HALASGSCDLSSRINFRKDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQ 263
             +A G  +L+ R+  R  +EL Q++   + F+ +++S    ++D +     +S  +   
Sbjct: 237 KNIAEGEANLTLRLEERGRDELSQVSVYFNAFVGRIQSLVISVRDSVDHSRQLSSSLSNV 296

Query: 264 IGRLEHNIHNQQSEISNSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREA 323
             +  H  ++ Q E  +  A  +Q   +   V  +   A++S K A + ++ +   +  A
Sbjct: 297 AHQAAHATNSMQQETQSVAAAINQMSATASEVAANAQLAAKSAKNADSQADSTNLVVTHA 356

Query: 324 QTQNQQLVEKAEITTKTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENG 383
               +QL  + E T++ A  L     ++  IL +I  IAEQTNLLALNAAIEAARAGE G
Sbjct: 357 MGNVRQLSSELEETSEIAKALKVSSGEIGQILDVIVGIAEQTNLLALNAAIEAARAGEAG 416

Query: 384 RGFAVVADEVRHLAEKTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCV---AAIE 440
           RGFAVVADEVR LA +T  ST ++  ++  + G    +   +  +   + N V   A + 
Sbjct: 417 RGFAVVADEVRTLASRTQQSTQEINAIIEAIRGAVDKVNASVARARQQSDNTVDETAQVM 476

Query: 441 SGSNLVDKAIIDVNQANSTNQNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISE 500
               L+ +AI    Q N  N      +++Q+ ++ +L E +  ++  + E L+ S T+  
Sbjct: 477 DALGLIKQAI---GQINDMNLQIATATDEQSAVIAELNENINRINEISVENLSKSETVGH 533

Query: 501 HSKELLRSASQ 511
            S  +   + Q
Sbjct: 534 TSDRIAEDSRQ 544