Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25-INTG

 Score =  152 bits (385), Expect = 3e-41
 Identities = 108/360 (30%), Positives = 172/360 (47%), Gaps = 5/360 (1%)

Query: 160 QVASQLRNQAFMLSIGFLLVTLIAIYWLLQRTLIAPLNDLKVLCHALASGSCDLSSRINF 219
           Q A  L+      + G L + LI   WL    +  P+N +  +   +ASG  DL+ R+ +
Sbjct: 354 QAAGTLKALLVAAAAGLLGLLLI---WLTATGVTRPINSVAAMLKDIASGEGDLTQRLAY 410

Query: 220 RKDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQSEIS 279
            K +ELG+L N  + F+ K++ T A IK  I E    + +      +    +  Q  EI 
Sbjct: 411 AKKDELGELVNWFNRFLDKLQPTIAQIKQSITEARGTADQSSAIARQTSEGMQVQFREID 470

Query: 280 NSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEKAEITTK 339
                 ++   +   V  S   A+ + + A  S+ +    + ++      L E+      
Sbjct: 471 QVATASNEMSATAHDVANSASNAANAARGADQSAREGMQIIEQSTRDITTLAEEVSKAVT 530

Query: 340 TATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVRHLAEK 399
               L    E++  +L++IRSIAEQTNLLALNAAIEAARAGE+GRGFAVVADEVR+LA++
Sbjct: 531 EVEALAVNSEQIGSVLEVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRNLAKR 590

Query: 400 TSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDKAIIDVNQANST 459
           T  S  ++  ++ ++   +R ++  M  S   A++    I      + K    V   +  
Sbjct: 591 TQDSVEEIRLVIERIQSGTRGVVATMHSSQSQAQSNAGQIHQAVQALGKISDAVTVISDM 650

Query: 460 NQNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEH-SKELLRSASQTRSNLKQ 518
           N      +EQQ+ + E++   +  +     E LT  AT S   S +L   ASQ    + Q
Sbjct: 651 NLQIASAAEQQSAVAEEVNRNVSAI-RTVTETLTGQATESAAISSQLNALASQQMKLMDQ 709