Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  148 bits (373), Expect = 7e-40
 Identities = 93/364 (25%), Positives = 182/364 (50%), Gaps = 13/364 (3%)

Query: 160 QVASQLRNQAFMLSIGFLLVT--LIAIYWLLQRTLIAPLNDLKVLCHALASGSCDLSSRI 217
           +V + L   A+ + +  +L+    I +   +  ++  P+  +  +   +  G  DL  R+
Sbjct: 275 EVFALLEESAYQILVWTVLIAAAFIGLSTFVSASVSQPIAKVADMLQDIGQGEGDLRQRL 334

Query: 218 NFRKDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQSE 277
               ++EL QLA   + FI K++ +   + D  V+++  +  V  Q  + + +   Q+ +
Sbjct: 335 PVEGNDELAQLAKGFNSFIEKIQHSIIEVTDTSVQLSHAAKDVANQAQQTQDDSQLQKDQ 394

Query: 278 ISNSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEKAEIT 337
               V   ++   ++  +  +   A+++ K A  +S + +  +  A+    QL +  E  
Sbjct: 395 TMMVVTAINEMGATVHEIAGNAAQAADNAKDADNASSNGQIVVTRARDTINQLSQDVEQV 454

Query: 338 TKTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVRHLA 397
                 L T    +  IL +IR++++QTNLLALNAAIEAARAGE GRGFAVVA+EVR+LA
Sbjct: 455 GNVIESLATHTTSIGSILDVIRAVSDQTNLLALNAAIEAARAGEAGRGFAVVAEEVRNLA 514

Query: 398 EKTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDKAIIDVNQAN 457
            +T+AST++V+ ++  L   +   +  M +S   ++  V A++  S+ + +    +    
Sbjct: 515 SRTAASTDEVQKMIDNLQSEAARAVEAMTQSKSRSQEGVQAVDEASHTLTEISQQIGAIT 574

Query: 458 STNQNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKELLRSASQTRSNLK 517
             N      +E+Q+ +VE +              +T+ + I++ + E  ++ +Q   +L 
Sbjct: 575 DMNIQVAAATEEQSTVVEDI-----------NRNVTEISEITQRTSETSQAVAQASQSLN 623

Query: 518 QLSH 521
           QL+H
Sbjct: 624 QLAH 627