Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 653 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  163 bits (413), Expect = 2e-44
 Identities = 117/375 (31%), Positives = 198/375 (52%), Gaps = 28/375 (7%)

Query: 150 VTEWGFDQVQQVASQLRNQAFMLSIGFLLVTLIAIYWLLQRTLIAPLNDLKVLCHALASG 209
           ++E G    ++V+ ++     +L I  LL   I +  ++ ++L+  + ++  L + +A G
Sbjct: 284 LSEAGDKAAKEVSQKITFINIILLIAILLSAFITV--IVTQSLLRTIREVVALLNEIADG 341

Query: 210 SCDLSSRINFRKDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEH 269
             DL+ R+     +EL QLA   + F+ +++   A +KD  V++   S ++         
Sbjct: 342 EADLTQRLPVNGHDELTQLAKNFNRFVLRIQQLVAEVKDTTVQMVSASTQLNSVTHSATQ 401

Query: 270 NIHNQQSEISNSVAIGHQSQDSIKAVTESIYAASESLKQAVTS---SEDSKAQL---REA 323
           ++ +QQ+E          +Q    A+TE   +A E    A T+   SED+KAQ    RE 
Sbjct: 402 DMSSQQNE----------TQLVASAITEMAASAVEVAASADTANKLSEDAKAQALLGRET 451

Query: 324 QTQN----QQLVEKAEITTKTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARA 379
            T+     ++L  K E +  T  +L    +K+  +L +IR+IAEQTNLLALNAAIEAARA
Sbjct: 452 VTRATHSMRELASKVEASATTIEQLRNDSDKIGAVLDVIRAIAEQTNLLALNAAIEAARA 511

Query: 380 GENGRGFAVVADEVRHLAEKTSASTNQVETLLTQL---SGYSRNLIGYMEESLVAARNCV 436
           GE GRGFAVVADEVR LA +T  ST Q++ ++  L   SG +  ++G   E+  +    V
Sbjct: 512 GEQGRGFAVVADEVRSLASRTQESTKQIQQIIQTLQDRSGSAATMMGQSREATNSTVEQV 571

Query: 437 AAIESGSNLVDKAIIDVNQANSTNQNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSA 496
             +ES  + + + ++ +   +S +Q A H +EQQ+ +VE++   +  +++ A   LT   
Sbjct: 572 TQVESALSTITEMVMSI--THSVSQMA-HAAEQQSTVVEEINMSINSVNDSANRTLTGVK 628

Query: 497 TISEHSKELLRSASQ 511
             +  +  LL    Q
Sbjct: 629 QAASSANGLLGIGQQ 643