Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  152 bits (383), Expect = 5e-41
 Identities = 103/369 (27%), Positives = 186/369 (50%), Gaps = 18/369 (4%)

Query: 159 QQVASQLRNQAFMLSIGFLLVTLIAIYWLLQRTLIAPLNDLKVLCHALASGSCDLSSRIN 218
           +Q  S +R +  M+ +  LL+   AI W + +++  P+ +     + +A G  DL+ RI 
Sbjct: 273 EQAMSDIRLKLIMIGVIALLIGT-AIAWFIAKSITRPIAETTDALNDIAEGEGDLTRRIE 331

Query: 219 FRKDNELGQLANAIDDFIAKVESTFAPIKDRIV-------EVTDVSHKVEQQIGRLEHNI 271
            +  +E+ QLA A + F  K+ +T A + D          E++ ++H+ +Q   R +H  
Sbjct: 332 VKSKDEMAQLAQAFNRFAEKIHATVAQVSDSTSLLATSAEEMSAITHETQQMANR-QHLE 390

Query: 272 HNQQSEISNSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLV 331
             Q +   N +A       +++ V  +   A+++   A  S+E  K  + +  +    L 
Sbjct: 391 TEQVATAMNEMAA------TVQEVAHNATDAADAATHASESTEQGKLLVEKVISTISLLA 444

Query: 332 EKAEITTKTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVAD 391
           ++         EL     ++  +L +IR+IA+QTNLLALNAAIEAARAGE GRGFAVVAD
Sbjct: 445 DEIAQAANAINELERNTTQIDSVLVVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVAD 504

Query: 392 EVRHLAEKTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAI-ESGSNL--VDK 448
           EVR LA +T AST +++ ++  L   ++  +  M  S    ++CV+ + E+GS L  + +
Sbjct: 505 EVRTLASRTQASTTEIQQMIETLQQSAKATVSSMNTSTATTQSCVSLVHEAGSALEAITQ 564

Query: 449 AIIDVNQANSTNQNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKELLRS 508
           A+  ++Q N    +A ++    +  + + +  +  +  +A E    +A   +   +L   
Sbjct: 565 AVSTISQMNIQIASAANEQCAVSAEINKNVNNINDIATNATESAMQTARAGDELAQLSMR 624

Query: 509 ASQTRSNLK 517
            +   S  K
Sbjct: 625 LTTLLSQFK 633