Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  143 bits (361), Expect = 1e-38
 Identities = 97/370 (26%), Positives = 191/370 (51%), Gaps = 14/370 (3%)

Query: 156 DQVQQVASQLRNQAFMLSIGFLLVTLIAIYWLL--QRTLIAPLNDLKVLCHALASGSCDL 213
           D  Q V  Q+ +++FM+ +  L++T I  + ++     ++ P+ ++    + +A G  DL
Sbjct: 187 DYRQTVTEQMADKSFMILLIALVLTGITAFIIMVAAHRMVVPIKNMADSLNDIAKGEGDL 246

Query: 214 SSRINFRKDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHN 273
           + R++ + ++E+ QL  A + F+ K+++    + +   +V   ++ +  Q   +   + +
Sbjct: 247 TKRLSVKGEDEIAQLGQAFNLFVDKLQTIIGDVANATAKVKSAANAIHDQTKVMSSQLLS 306

Query: 274 QQSEISNSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEK 333
             +E    V    +   +   V ++    +E+ + A     +++  +  +  +   L+ +
Sbjct: 307 HNNETDQVVTAITEMSSTASEVAQNTTQVAEATQAATGDVANAQRCVDASLEEIAGLMSQ 366

Query: 334 AEITTKTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEV 393
                 +   L+ Q +K+  +L +I  IAEQTNLLALNAAIEAARAGE GRGFAVVADEV
Sbjct: 367 INNAAGSIKSLSEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 426

Query: 394 RHLAEKTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDKAIIDV 453
           R+LA +T AST ++  +L++L       +  M+ES    ++CV +++S S  + +++  V
Sbjct: 427 RNLASRTQASTLEINEMLSELHKLVSVAVKTMDES---QQSCVRSVDS-SRAISESLGSV 482

Query: 454 NQA----NSTNQNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKELLRSA 509
             A    N  +      + +Q+ + E++   +  +     ELL      SE + ++ ++ 
Sbjct: 483 TSAVTAINDMSTQIATAATEQSSVTEEINRNVYAIQEIVNELLHS----SEDAAKVSQTV 538

Query: 510 SQTRSNLKQL 519
           SQ   NL +L
Sbjct: 539 SQEGINLGKL 548