Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  149 bits (375), Expect = 4e-40
 Identities = 97/367 (26%), Positives = 180/367 (49%), Gaps = 16/367 (4%)

Query: 155 FDQVQQVASQLRNQAFMLSIGFLLVTLIAIYWLLQRTLIAPLNDLKVLCHALASGSCDLS 214
           F  +   A Q+     +++ GF+++ ++     +  ++  P+  +  +   +  G  DL 
Sbjct: 277 FALLTDAAYQILIWTLIIAAGFIMLAIV-----VAGSVSRPIAQVAAMFRDIGEGEGDLR 331

Query: 215 SRINFRKDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQ 274
            R+  + ++E+ QLA   + FI+K++ +   +     ++   +  V  Q  +   + H Q
Sbjct: 332 QRLPVKGEDEIAQLAQGFNSFISKIQDSVIEVAQTSEQLGFSAKDVSNQAQQTLEDSHEQ 391

Query: 275 QSEISNSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEKA 334
           +      V   ++   ++  +  +   A+ + K A T S   +  +  A+    QL +  
Sbjct: 392 KDRTMMVVTAINEMGATVNEIASNAAQAAVAAKDADTESNSGQVVVTRARDTINQLSQDV 451

Query: 335 EITTKTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVR 394
           E   +    L T  + +  IL +IR+I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR
Sbjct: 452 EQVGEVIESLATHTKSIGGILDVIRAISEQTNLLALNAAIEAARAGEAGRGFAVVADEVR 511

Query: 395 HLAEKTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDKAIIDVN 454
           +LA +T+ASTN+V+ ++ +L   +   +  M +S   +   VAA++  S  +      + 
Sbjct: 512 NLASRTAASTNEVQGMIDKLQSEASRAVNAMAQSRARSHEGVAAVDEASQSLVGISDRIG 571

Query: 455 QANSTNQNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKELLRSASQTRS 514
             +  N      +E+Q+ +VE +              +T+   I++ +    ++A+Q   
Sbjct: 572 LISDMNIQVAAATEEQSTVVEDI-----------NRNVTEINEITQRTASTAQAAAQASL 620

Query: 515 NLKQLSH 521
            L QL+H
Sbjct: 621 ALNQLAH 627