Pairwise Alignments

Query, 244 a.a., IclR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., transcriptional regulator, IclR family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 57.0 bits (136), Expect = 4e-13
 Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 8/217 (3%)

Query: 14  KSLQLLMQVAVNPEPVSAKGLSEQLQVPLSSLYRHLKLLKEWNLIEESPHDKTLIIGPAA 73
           K+L +L QVA    PV    L      P ++LYR ++ L    ++   P  +T   G   
Sbjct: 13  KALAVLDQVAAFGRPVRFGELLAASPFPKATLYRFVQTLTSQGMLAFDPERQTYAPGLRL 72

Query: 74  LLLMRSYETSQHNLDAVEAVLSRLQKQTGEMAAYMVPVGYRALCVSQRESMQALRCSFVQ 133
           + L  +              L  L  + GE          + L V +R + + +      
Sbjct: 73  VRLAHAAWEQSALAPIARDHLDALSAELGETVHLAQLDNAQVLYVDKRNAAKPVEMFSQA 132

Query: 134 GQSQPLLRGASSKVMLAYMPAARCEKIL---RYFGEDP----TLDKWQSEFEKIRRHGYA 186
           G+  P       K MLA++P A    IL    Y    P    +  + +++ EK R  GYA
Sbjct: 133 GKVGPAYCTGVGKAMLAFLPDAELAPILDQQSYHAFTPHTLTSAAQLRTDLEKTRARGYA 192

Query: 187 VSTSEIDPGVSGISAPVM-KGSKLIGAISVMAPAHRV 222
           +   E +PG+  ++ P++ +  +++GA+SV +   R+
Sbjct: 193 LDREEHEPGIICVALPILSQTGRVLGALSVTSTTTRM 229