Pairwise Alignments

Query, 849 a.a., chitinase from Vibrio cholerae E7946 ATCC 55056

Subject, 960 a.a., glycoside hydrolase from Rahnella sp. WP5

 Score =  118 bits (296), Expect = 1e-30
 Identities = 108/439 (24%), Positives = 171/439 (38%), Gaps = 85/439 (19%)

Query: 144 MNVDPNNKSYTIPQNTVIGTYFVEWSIYDRK--FTVDNIPGQNLTHILYGFIPICGPNES 201
           +++    K+    Q  VIG YF EW +Y+    FT D +    LTH+ YGF  +      
Sbjct: 146 IDLQNREKANVAAQRKVIG-YFPEWGVYEAHNFFTPDKVDYSGLTHLNYGFAVVKN---- 200

Query: 202 LKSVGGNSFNALQTACKGVPDFEVVIHDPWAA--YQKSFPQAGHQYSSPIKGNYAMLMAL 259
                            GV    V +HD   A    K   Q           N A ++  
Sbjct: 201 -----------------GV----VTMHDTDKAPGLMKDLEQRTDA------ANVAHMI-- 231

Query: 260 KKTYPDLKIIPSIGGWTLSDP--FFSFT-DKAKRDVFVASVKRFLKTWKFYDGVDIDWEY 316
                      S+GGW  S    F + T   A  +    S+  ++  W F DG+DIDWEY
Sbjct: 232 -----------SVGGWNNSQEGVFEAATATDAGIEKLANSMVSYMAQWHF-DGLDIDWEY 279

Query: 317 PGGGGQAADLGDPVKDGPAYVALMAELRAMLDELEAETGRKYELTSAIGVGHDKIEDVNY 376
           P          D   +   +  L+  LR  LD    +  + Y+L++A+   H+ I+ +N 
Sbjct: 280 P----------DNDTEKNQFTKLLQSLRTKLDTQGKKDDKYYQLSAAVTTNHNNIQFINP 329

Query: 377 GQAVQYMDYIFAMTYDFYGGWNNVLGHQTALYCGSFMRPGQCDGKGVDENGEPYKGPAYT 436
                 +D +  M YD +G +  + GH   LY                EN          
Sbjct: 330 AVTAPLLDSVNVMAYDIHGAFEPLTGHNAPLY----------------ENSHDEDKDLNV 373

Query: 437 TDNGIQLLLAQGVPPSKLVVGAAMYGRGWEGVTPASLKDPNDPMTGVGNGKLKGTTAQGV 496
            D     +    VP +KL++G   YGRGW G  P +   P  P    G       T +G 
Sbjct: 374 ADTMNAYVNTWQVPKTKLMMGIPYYGRGW-GYVPGTELIPGLP----GMFNTGAATVKGA 428

Query: 497 WEAGVIDYKGVKNFMLGANKTGVNGFEYGYDEQAEAPWVWNRTTGQLVTFDDDRSVKAKG 556
           W+    D+ G   + +   K     +   +D ++  P+++++T  + +T+DD +S+  K 
Sbjct: 429 WD-DAKDFTGTNPWYVLKQKLNSGEYTRYWDSESHVPYLYSKTKQEFLTYDDPQSIGEKV 487

Query: 557 AYVRNLGLAGLFSWEIDAD 575
            Y+ + G  G   W+I  D
Sbjct: 488 DYILDQGFGGAILWDISGD 506



 Score = 29.3 bits (64), Expect = 0.001
 Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)

Query: 805 YTGGQQVTWAGKTWEAKWWT-RGEDPSKSGQW 835
           Y GG  V + G  W A+WW  +G  P     W
Sbjct: 90  YKGGDTVRFLGYYWTAQWWVDQGISPGTDPVW 121