Pairwise Alignments

Query, 849 a.a., chitinase from Vibrio cholerae E7946 ATCC 55056

Subject, 989 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 64.3 bits (155), Expect = 3e-14
 Identities = 43/173 (24%), Positives = 82/173 (47%), Gaps = 16/173 (9%)

Query: 589 GGTTTPPVNKAPVANAGADITVTGPAAVSLDGSASKDSDGSIASYLWEQTAGPAVTLTGA 648
           GG  TPP+ +AP    G D        +SL  S +  + G+ ASY W QT+GP+V L+G 
Sbjct: 30  GGAVTPPLAQAPSVELGPDQQTWNHETLSLTASVTLFNPGT-ASYQWLQTSGPSVKLSGL 88

Query: 649 NSAKASFNAAEVTEKQTFTFKLTVTDNKGATATDTVVVTVNPKSTTPVNTAPVAALSA-- 706
           +S   + +A+++ + +     L VTD  G ++ D++ + +  K +    +   + +    
Sbjct: 89  SSDTLTLDASDLLQDEDIALSLKVTDAAGLSSEDSLTLKLKDKISAASQSGDASLIEGLE 148

Query: 707 PASVKAGATVVVDASASSDADQDPLSFTWDLPVGVNATVQGAKVTFVAGEYTQ 759
           P  +  G  ++ D   +        SF       +N   Q  +V++ +G+++Q
Sbjct: 149 PKVIARGLKLIQDYRGAQK------SF-------LNTIYQADRVSYDSGQHSQ 188



 Score = 26.9 bits (58), Expect = 0.006
 Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 11/103 (10%)

Query: 643 VTLTGANSAKASFNAAEVTEKQTFTFKLTVTDNKGATATDTVVVTVNPKSTTPVNT---- 698
           V  T A S+KA F AA V      TF +T TDN     T   + T    ST    +    
Sbjct: 527 VDKTVALSSKAPFRAAGVYALPGQTFSVTRTDN-SQVETKVFINTQRSGSTQEYGSKGYN 585

Query: 699 APVAALSAPASVKAGATVVVDASASS------DADQDPLSFTW 735
            P    S   ++K G T+ + +          +A+  P+ FT+
Sbjct: 586 RPKYLQSPAIAIKPGETITLTSPYGGPVQIRFNANDLPVEFTF 628