Pairwise Alignments

Query, 211 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 85.9 bits (211), Expect = 6e-22
 Identities = 68/244 (27%), Positives = 101/244 (41%), Gaps = 55/244 (22%)

Query: 9   CLLAL-CFAASASAKVTMEIPDTIDLLVVNGSSPKLSGGFFDATKKLELEDGEQQIVFRY 67
           CL  +  F   A A+VT+ +PD+ + L++NG            + +L  ++G QQ+VF  
Sbjct: 7   CLFLIPLFFVQAHAEVTITLPDSAEPLLLNGKDI--------TSHQLISQNGPQQLVFNA 58

Query: 68  SPYFSQGNDRIIIDSEVVIATFDAANQELRFDMPKYRDAPQATKAIKTMQWQLLDQQGKA 127
              + +   +    SE +I TF   N   R  +PK      A K     Q  L D QG  
Sbjct: 59  RASYREFGQQKRFVSETLIVTFSGENNHYRVSLPKISSPKSAEKFNDVPQIGLTDTQGNK 118

Query: 128 VELRQDRLIKEGMQIGRNFEFETAEYNKKGGVAALTSSMAVQPI----------AQQEIS 177
           V  + D+L+K+G+QIGRN+  E   YN   GVAA+  +  VQ            A    +
Sbjct: 119 VAYKIDKLLKDGIQIGRNYSEEIKAYNIGQGVAAIAINQPVQMAPSTSSSASSGAASPAA 178

Query: 178 NATAMAAAE------------------------------------EMLHFWYNKADAETK 201
            +TA+AA +                                    +ML FWY +AD  T+
Sbjct: 179 TSTALAAQQTTAPQGAQPVGQPTSQPNTQPVSQTGTPRRDQINVGQMLDFWYEQADEATR 238

Query: 202 ARFK 205
             FK
Sbjct: 239 EAFK 242