Pairwise Alignments

Query, 330 a.a., AEC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., membrane protein, putative from Pseudomonas fluorescens FW300-N2E2

 Score =  218 bits (555), Expect = 2e-61
 Identities = 131/308 (42%), Positives = 183/308 (59%), Gaps = 8/308 (2%)

Query: 26  ITGPICLMLGLGVLFKRINLINENFIEVASRIVFQVTLPAMLFLSIVSSKHDFSSSTSLV 85
           IT P+  ML LGVL KRI  IN+NFI +AS +VF VT+PA+LFL I+ +    +    L+
Sbjct: 11  ITAPVFAMLFLGVLLKRIYWINDNFIHIASSLVFNVTMPALLFLGILHADLHAALQPDLL 70

Query: 86  VYSLIANMLFFLFTLFSTRKLIDRPHDWGVITQGGFRANTAIIGLAYVANTYGNAGVALA 145
           +Y  IA ++ F      +     R  D G+ TQG FR N  +IGLA  A+ YG+ G++L 
Sbjct: 71  IYFSIATLVSFSMAWGWSIWRCPR-EDRGIYTQGAFRGNNGVIGLALAASMYGDYGISLG 129

Query: 146 AIYVASTTVLFNIQAVIAL---TPRGESNGWQAGKLMFKTLTKNPLIISIVLGFLCYLAS 202
           AI  A   + +N  + I L   +P  +S+ W     + K++  NPLIIS+++        
Sbjct: 130 AILAALVILFYNTLSTIVLAVYSPVIKSDPWS----ICKSVISNPLIISVIVAAPFAYWH 185

Query: 203 VPIPKIVTDAGHYFANMTLPLALLCTGGSLNLNSLKDDRHSAWFATGYKLILSPLLITGG 262
           + +P     +  Y + MTLPLAL+C GG+L+L +L+     A  ++  K++  PLL T G
Sbjct: 186 IGLPNWFETSAKYLSQMTLPLALICIGGTLSLAALRKSGKMALSSSLVKMVGLPLLTTLG 245

Query: 263 AWLLGFRGLDLGLLFLMTSAPTAAASYVMARAMGGNATLAANIIALTTVFSLFTCTLGIF 322
           AWL GFRG +LG+LFL   +PTAAASYVMARA  GN  LAA II +TT+ +  T  LGIF
Sbjct: 246 AWLWGFRGAELGILFLYFGSPTAAASYVMARAADGNHELAAAIIVITTLMAAITTNLGIF 305

Query: 323 LLSSFGVI 330
           +L   G I
Sbjct: 306 VLQWGGWI 313