Pairwise Alignments

Query, 330 a.a., AEC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., Predicted permeases from Pseudomonas stutzeri RCH2

 Score =  196 bits (499), Expect = 5e-55
 Identities = 112/306 (36%), Positives = 174/306 (56%), Gaps = 2/306 (0%)

Query: 25  TITGPICLMLGLGVLFKRINLINENFIEVASRIVFQVTLPAMLFLSIVSSKHDFSSSTSL 84
           ++T P+  ML LGV   R+  I+  F+  AS +VF+ T+P +LF+SI+ +    +   +L
Sbjct: 10  SVTAPVFAMLFLGVALMRLRWIDSAFVHTASSLVFKGTMPTLLFISIIKADLSAALQPAL 69

Query: 85  VVYSLIANMLFFLFTLFSTRKLIDRPHDWGVITQGGFRANTAIIGLAYVANTYGNAGVAL 144
           ++Y ++A +  F             P D GV  QG FR N  I+GLA  ++ YG+ G++L
Sbjct: 70  LLYFVLATVATFALAWLWALWRCPAP-DRGVYVQGAFRGNNGIVGLALASSLYGDYGLSL 128

Query: 145 AAIYVASTTVLFNIQAVIALTPRGESNGWQAGKLMFKTLTKNPLIISIVLGFLCYLASVP 204
             +      +++N  + + L      +G    K +  ++ +NPLII +V         V 
Sbjct: 129 GGVLAGVVILVYNSLSAVVLAIYSP-DGRVGPKDILLSILRNPLIIGVVAAVPFAYWQVA 187

Query: 205 IPKIVTDAGHYFANMTLPLALLCTGGSLNLNSLKDDRHSAWFATGYKLILSPLLITGGAW 264
           +P  +  +G YFA MTLPLAL+C G +L+L++L+    SA  ++  K++  P L T GAW
Sbjct: 188 LPGWLMTSGQYFAQMTLPLALICIGATLSLDALRKSSGSALSSSLMKMVWLPALATLGAW 247

Query: 265 LLGFRGLDLGLLFLMTSAPTAAASYVMARAMGGNATLAANIIALTTVFSLFTCTLGIFLL 324
             GFRG +LG+LFL  ++PTAAAS+VMARA+  N  LAA II +TT+ +  +   G+FLL
Sbjct: 248 ACGFRGAELGILFLYFASPTAAASFVMARAVNSNHQLAATIIVITTLMAALSINAGLFLL 307

Query: 325 SSFGVI 330
              G I
Sbjct: 308 GWLGWI 313