Pairwise Alignments

Query, 330 a.a., AEC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., Auxin Efflux Carrier (NCBI) from Rhodospirillum rubrum S1H

 Score =  107 bits (267), Expect = 4e-28
 Identities = 82/290 (28%), Positives = 136/290 (46%), Gaps = 8/290 (2%)

Query: 29  PICLMLGLGVLFKRINLINENFIEVASRIVFQVTLPAMLFLSIVSSKHDFSSSTSLVVYS 88
           P+ L++ +G L +R  ++++ F   A ++ + +T PA+L  ++  +     +   +   S
Sbjct: 10  PVFLIILVGFLLRRWKVLSDGFWLPAEKLTYFITFPALLAANLAGADLRGVAWAPVAAVS 69

Query: 89  -----LIANMLFFLFTLFSTRKLIDRPHDWGVITQGGFRANTAIIGLAYVANTYGNAGVA 143
                LIA ++    +L + R  I  P    V  QG  R NT  IGLA     +G  GV 
Sbjct: 70  VGGIFLIAALMLAARSLLARRLAIGDPAFTSVF-QGAIRPNT-YIGLALATVLFGPFGVT 127

Query: 144 LAAIYVASTTVLFNIQAVIALTPRGESNGWQAGKLMFKTLTKNPLIISIVLGFLCYLASV 203
           L A+ +A    L N+ AV  +   G          M + +  NPLI++ ++G    +  +
Sbjct: 128 LMALCIAIVVPLVNVLAVACMVRFGHGQSASLSA-MARGIATNPLILACLVGIAMNIGGL 186

Query: 204 PIPKIVTDAGHYFANMTLPLALLCTGGSLNLNSLKDDRHSAWFATGYKLILSPLLITGGA 263
            +P ++  A     +  LP+ LL  G  L+   L+    +   ++  KL+L P L   GA
Sbjct: 187 GLPPVLGPALTILGSAALPIGLLAVGAGLSGVGLRRAAPALLVSSAAKLVLLPGLTLIGA 246

Query: 264 WLLGFRGLDLGLLFLMTSAPTAAASYVMARAMGGNATLAANIIALTTVFS 313
             LG       L  L  + P + +SYV+AR MGG+ATL A  I + T+ S
Sbjct: 247 LALGMDAPTTALCVLYAALPCSQSSYVLARQMGGDATLMATAITVQTLLS 296