Pairwise Alignments

Query, 330 a.a., AEC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., Fatty acid transporter (from data) from Shewanella oneidensis MR-1

 Score = 65.9 bits (159), Expect = 1e-15
 Identities = 67/309 (21%), Positives = 129/309 (41%), Gaps = 20/309 (6%)

Query: 25  TITGPICLMLG---LGVLFKRINLINENFIEVASRIVFQVTLPAMLFLSIVSSKHDFSSS 81
           TI  P+  + G   LG L +++  +     +V ++ V+ +  PA+L +++     +    
Sbjct: 2   TILTPLFAVFGIMLLGTLVQKLRFLPVETDQVLNQYVYYIAFPAVLLIALAQQPIEEILQ 61

Query: 82  TSLVVYSLIANMLFFLFTLFSTRKLIDRPHDWGVITQGGFRA---NTAIIGLAYVANTYG 138
              +     A ++ +L  +  +  L+  P    +       A   NTA IG+  +   + 
Sbjct: 62  WRFIAGYSAAMLVIYLMCIGIS--LLVNPKQHAIAAVRALNATFGNTAFIGIPLLVIIFP 119

Query: 139 NAGVALAAIYVASTTVLFNIQAVIALT-PRGESNGWQAGKLMFKTLTKNPLIISIVLGFL 197
               AL A   +  +VL    A+++L     +     A  +M   +TKNP++I   +G  
Sbjct: 120 EQQSALVAAIASLLSVLMFAVALVSLELTTNKHRQHHAVVIMCLAITKNPIVIGCFIGIS 179

Query: 198 CYLASVPIPKIVTDAGHYFANMTLPLALLCTGGSLNLNSLKDDRHSAWFATG-------- 249
                + +P  V        N + P AL   G  L   +++  + S  F+          
Sbjct: 180 ISALGITLPSGVALMIQQIGNTSSPCALFAVGMVL-AKAMRYQKDSKLFSLTNFVELCLI 238

Query: 250 --YKLILSPLLITGGAWLLGFRGLDLGLLFLMTSAPTAAASYVMARAMGGNATLAANIIA 307
             +KLIL P L+      +G  G  L +  ++++ PTAA+ Y++A+     A+  A  I 
Sbjct: 239 NLFKLILQPALVFFMLKSIGVTGDYLVMGVILSALPTAASVYLLAQRYNTQASTCAQGIL 298

Query: 308 LTTVFSLFT 316
             T+ + F+
Sbjct: 299 FGTIVTFFS 307