Pairwise Alignments

Query, 330 a.a., AEC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  421 bits (1081), Expect = e-122
 Identities = 207/318 (65%), Positives = 264/318 (83%)

Query: 13  MTDIIAQLQFSATITGPICLMLGLGVLFKRINLINENFIEVASRIVFQVTLPAMLFLSIV 72
           M +II QL FSA+ITGPICLML LGV+ KR  +I+E+FI+VAS++VF VTLPA+LFLSI+
Sbjct: 1   MGNIIEQLLFSASITGPICLMLALGVILKRTQVIDEHFIDVASKLVFNVTLPALLFLSII 60

Query: 73  SSKHDFSSSTSLVVYSLIANMLFFLFTLFSTRKLIDRPHDWGVITQGGFRANTAIIGLAY 132
           SS HD ++S  L+ Y L+AN+LFF+ + ++T++    P D GVI QGGFRANTAIIGLAY
Sbjct: 61  SSHHDLAASAPLIGYGLLANLLFFILSTYATKRFFPAPKDQGVIIQGGFRANTAIIGLAY 120

Query: 133 VANTYGNAGVALAAIYVASTTVLFNIQAVIALTPRGESNGWQAGKLMFKTLTKNPLIISI 192
           V+N YG +GVALAA+YVA+ T+L+NIQAV+ L+PR E +   A  ++ KT+TKNPLII+I
Sbjct: 121 VSNAYGESGVALAAVYVAAMTLLYNIQAVVCLSPRDEESSRHAFTVIIKTITKNPLIIAI 180

Query: 193 VLGFLCYLASVPIPKIVTDAGHYFANMTLPLALLCTGGSLNLNSLKDDRHSAWFATGYKL 252
           +LG L YL ++P+PK+V DAG YFANMTLPLALLCTGGSLN+ SLK ++++ WF+T  KL
Sbjct: 181 ILGMLFYLLAIPVPKMVLDAGQYFANMTLPLALLCTGGSLNIGSLKHEKYATWFSTALKL 240

Query: 253 ILSPLLITGGAWLLGFRGLDLGLLFLMTSAPTAAASYVMARAMGGNATLAANIIALTTVF 312
           I +PL I+ GA + G+RG++L L+FLM+SAPTAAASYVMARAMG NATLAANIIALTTV 
Sbjct: 241 IFAPLFISLGALIFGYRGVELALVFLMSSAPTAAASYVMARAMGANATLAANIIALTTVC 300

Query: 313 SLFTCTLGIFLLSSFGVI 330
           SLFTCTLGIF+L+ FG+I
Sbjct: 301 SLFTCTLGIFILTIFGLI 318