Pairwise Alignments

Query, 1085 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1126 a.a., conserved hypothetical protein from Pseudomonas syringae pv. syringae B728a

 Score =  234 bits (596), Expect = 4e-65
 Identities = 229/947 (24%), Positives = 395/947 (41%), Gaps = 86/947 (9%)

Query: 16  AQNPASA---CPFKQPLIGIIPVRYAFDV--YDDQGQALHPLPKADRQWKGQFSIKQRSY 70
           A+ PA+A   CPF+ P I I+PVRYA D   YD   + L PL K  R W     +K RSY
Sbjct: 17  AKTPATATSLCPFRGPDIAIVPVRYALDRSRYDAAPEKLKPLLKGSR-WAVMPKLKTRSY 75

Query: 71  TLRQLRDGWLYVYDETAKTLHEY--EVVGCKLTKIDWSDDEANKPTHERGSKGESKSCLL 128
           TLRQL DG++YVYDETA T HEY        L++I W+D +    +  R    + K  LL
Sbjct: 76  TLRQLYDGYVYVYDETAGTFHEYFSSAANGHLSRIIWTDAQIG--SDRRSGADDGKPFLL 133

Query: 129 YPAQHTLSIGYAHQRWTWRVCEHMRSNTSSRHAVMRKVSLKQFESNGTHPHAHFAQYLED 188
           YP  + L I ++ Q+WTWR+CEH+RSN +SR + M+ + LK++      P       + +
Sbjct: 134 YPRNNRLHIAFSAQQWTWRICEHLRSNPASRASWMKALDLKRYCMTMAEPDTLPLNRIAE 193

Query: 189 YVADIGTP--AEQDIFKDTCTPSLPVEKSEEAVKGTEFKFVADKAVVSSSDYLQDLPEQN 246
            VADI      + D F D+   ++P  K+        F  +        S     + +Q+
Sbjct: 194 AVADIDKEHVVDDDRFADS---AIPTSKASSEEADPLFSPIGADVFWQGS-----VEDQD 245

Query: 247 CGLFVALNDPLADVSDLFVTFTT-QVAKRTKAIGDETQQHKMQMAELTRTLGRIRLEEKE 305
             L +AL+DPLA  +DL +     Q A R         +HK+Q+A+    L     E ++
Sbjct: 246 SSLLIALDDPLAIFNDLGMQLAADQAAYRN---WQAEHEHKIQIAQTVTALCGAEGEPEK 302

Query: 306 IPDFVKQDPIRILELERAITEYCATAKLAEIESHHLASEGHSPSGNYALMQQ--QAEQKL 363
           +P  V+ +        + ++E  A  +    E   + +  ++  G   L+    ++ Q  
Sbjct: 303 LPASVRGNAAL---THQYLSEVEAYFEQCMFEQEQIGN--NTAPGGVLLLPDIFKSPQMR 357

Query: 364 AELKTLYRFEPTSAQMRKWRKKDNSFIDEVRWADLDNFLVEHYTELKGLDEQIKQHYAQF 423
             L+  Y   P+   ++ W+ + + +  EV  +    +L +H      L +Q++   + F
Sbjct: 358 RSLEMRYGSAPSDEALQAWKDR-HKWRREVDLSGARQYLQQHLPTGDTLLQQVQDTQSDF 416

Query: 424 MSAFNQLGLDPLLFGMDNQDEVQQAYLLALTSQFLVVVTQVNHDEKSLEILKKDLSFDSP 483
                 LG +PL   +D        YL  +     ++  Q   D  +   L +  + DS 
Sbjct: 417 RQWSTHLGTEPLKLFVDTSHPESLLYLQTVMLNLQIIYAQ---DNAASAWLAEQEANDS- 472

Query: 484 KNLMALASTGFSLQANQAINNHIQGFSTAFLSTSNPSDMVAFATAIANWDTFTGDERIQE 543
            +L      GFS     A++                 D+   AT I   +     +   +
Sbjct: 473 -SLFGTLRYGFSPALKHALHQEANALLNGL------GDITNLATRIGELNGTLNHQGFAD 525

Query: 544 KAWFKRWIEPAQSSFGALQKAVANQAKESWQAVMELLFPYQNQ-PKGGTPSLLANLRLLL 602
           K W K   +P Q +F AL +  ++  K ++++++    P  ++   G   +++A +R LL
Sbjct: 526 KPWMKALKQPVQDTFKALGQLASDAGKATFESILLAWVPIDSRLAVGKQQNIVALIRTLL 585

Query: 603 V-ESLVREEAVLQHNPKYAAELKQFETKLNAILQEMNDALE--LKPGNVSPKNHQIATAQ 659
           + + L+  +A +  +    A+LK + ++   + ++++D     L P   +P+    +  +
Sbjct: 586 IGQILLDSKARIAIDHNMLAKLKTWISEWQVLNKQISDTRRSWLYPTAYNPRKSIASHLR 645

Query: 660 SAQRKLGQLLSSELPMMLTLKNQAAMNTFQQSVNEKLSALSKNVKTSSASVSQKLGGLGG 719
             + KL +L    +P +L  +N       Q  +   + +     K    S  + L GLGG
Sbjct: 646 VLEEKL-RLHELSMPALLDFQNNQYARQLQDEIRLHVQSGKAITKEWLTSARRWLDGLGG 704

Query: 720 LLFALNLWNTMTVLENIRYKVAQYPSWNPFKNPALGEAIYATGNTIVVAGAISAGRAWVT 779
           +  ++     M    N  +          F    LG+  Y  G +  +  A+     W  
Sbjct: 705 IAGSITWGVIMLNFINTAFTYRDLTRDGDFSAKDLGKVTYGLGYSFNLLMAVFVEAPWAV 764

Query: 780 IAEQ----------GLLDRTLKNALNTTKVLGTKDALKTFAKSIALVATVGMIASALETW 829
           I +           G+LDR+          L   DA++ F  S+  +   G+ A+ LE  
Sbjct: 765 IRDATPVLIDGKNVGILDRS-AGYWRAKGNLVWGDAIRGFRVSMVAMGAFGVAAAVLEVL 823

Query: 830 ESWGKFNDSSKTDLERFGYLLKAGATGAQGIIFYIQFFTLLGSGIGG------------P 877
           +         + DL R         T  + I   ++F ++L  G G             P
Sbjct: 824 D--------IQDDLSRVN-------TSEEIIAMQLKFASVLMMGAGSAIQLIAGIFPTTP 868

Query: 878 SIAAISAGWMLAGFAVIGIVYLIGVILTNVFKRSELEIWLSKSTWGK 924
             A   + W      +IG VYL      N FK+  +  WL +  W +
Sbjct: 869 LTAVAMSPWFSITLLLIGTVYLFATTALNYFKQDSVGWWLRRCCWSR 915