Pairwise Alignments

Query, 694 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 687 a.a., VgrG protein from Pseudomonas fluorescens FW300-N2E2

 Score =  379 bits (972), Expect = e-109
 Identities = 235/697 (33%), Positives = 365/697 (52%), Gaps = 41/697 (5%)

Query: 6   YSIEVEGLEDETLVVRGFHGQESLSNSVFLGQACYGFRYQMQLASRVSNLTADQMVDKRA 65
           + + +  LE + L V  F G E++S           + ++++L S  S++  + +++++A
Sbjct: 10  FHLTIPDLEHD-LQVLAFEGCEAISTP---------YSFEIELISEQSDIDLECLLNQQA 59

Query: 66  ELKLYRNSQLVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPE 125
            L   +       VHG++    QGD G   T Y++ LVP L  L  R N RIFQ  +VP+
Sbjct: 60  FLAFNKQGS---GVHGLIYRVVQGDTGKRLTHYKIRLVPRLAYLEHRTNQRIFQHVSVPQ 116

Query: 126 ILSILLQEMGI--HDYAFALKRDCVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGK 183
           I++ +L+E GI    + F L      R++CVQYRESD+ F+ RL  EEGL Y F H    
Sbjct: 117 IITSILKEHGILTDAHRFQLSASYSPRDYCVQYRESDLHFIERLCHEEGLHYHFQHSESG 176

Query: 184 HTLYFSDASDSLSKLPEPIPYNALAGGTMDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAY 243
           H L F D      +L     Y   +G   D P IH    R +   S V  +DY FKK  +
Sbjct: 177 HHLVFGDDQTVFPRLEHRTVYKHGSGMVDDEPVIHRFGLRLETRTSRVTRRDYDFKKSTF 236

Query: 244 SFLQTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLL 303
               + Q   ++  +   + +D PG +  +  G   S+  L+  R     A G+S++P L
Sbjct: 237 LLESSCQ-PGIEKIRPDLEAYDYPGDFTQEKRGRLLSRRALERHRIDYRQAEGKSDQPAL 295

Query: 304 RAGYKFDLQEHLDPAMNRDWVVVSINHQGEQPQALQE--EGGSGATT------YNNQFSL 355
             G+   L  H     N  W++  ++H+G+QPQ L+E     +G T       Y N F  
Sbjct: 296 TTGHFLTLSGHPRQEWNDLWLLTEVHHEGKQPQVLEEIPPSDTGRTADHFNQGYRNHFVA 355

Query: 356 IPGHLHWRAEP-QPKPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSC 414
            P    +R++    KP+V G   A V GP+GEEI CD +GRVK+ F WDR  + ++ SSC
Sbjct: 356 TPWDATFRSQRVYQKPRVWGSQTAIVTGPKGEEIHCDLYGRVKVRFFWDRTGDFDDGSSC 415

Query: 415 WVRVSQGWAGSQYGFIAIPRIGHEVIVSFLNGDPDQPIITGRTYHATNTPPYTLPEHKTK 474
           W+RV+  WAG++YG + IPR+G EV+V+F+ GDPD+P+I+G   ++ N  PY LP HKT+
Sbjct: 416 WLRVASNWAGNRYGGVTIPRVGMEVLVTFIEGDPDKPLISGCLTNSANATPYPLPAHKTR 475

Query: 475 TVLRTETHQG-EGFNELSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDQHLTVENDQ 533
           TV R+ +  G +GFNEL  ED+AG+E IYL AQ+D +  IEND    I +++  TV  + 
Sbjct: 476 TVFRSCSSPGNKGFNELHLEDRAGQELIYLRAQRDMEQKIENDSRLEIGNERRETVRGNS 535

Query: 534 FTQIKHNQHLTVEGESRTLVKLDCSSEIGGSLQQKIGSKAIYDAGTEVHLKAGNKLVLEA 593
            T +   +H T   +    V+ +    +  +    +      +AG ++H+KAG  +VLEA
Sbjct: 536 ITALHAEEHRTTAADRTVQVEGNDYLRV-ANRHTCVDQTLAVEAGQQIHIKAGAHVVLEA 594

Query: 594 GNELTIKAGGSFIKVDAGGVHVVGSAINLNSGGSAGSGSGYGGKMAELPQGVDKAKTPQE 653
           G  L++KAGG  I ++  G++   S+  +  GG+  +G+      +  P   D    P  
Sbjct: 595 GASLSLKAGGQHILINHSGIY---SSSEIQLGGAPMAGA---TASSFTPGLTDPLAAPAP 648

Query: 654 IELAAVTPTQQSMSPLLKARQIEALKGPAPVCEVCEE 690
           I    + PTQ+++    KA  ++      P+CE C E
Sbjct: 649 I----LAPTQRALITASKAAGLDF----CPICEACRE 677