Pairwise Alignments

Query, 694 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 614 a.a., Rhs element Vgr protein from Pseudomonas syringae pv. syringae B728a

 Score =  264 bits (675), Expect = 8e-75
 Identities = 181/621 (29%), Positives = 310/621 (49%), Gaps = 45/621 (7%)

Query: 16  ETLVVRGFHGQESLSNSVFLGQACYGFRYQMQLASRVSNLTADQMVDKRAELKLYRNSQL 75
           + L++  F G E LS           F +Q+ L S  +++     + + A +++   +  
Sbjct: 25  QELLLDSFAGSEGLSAD---------FGFQLDLISDDASVKLKSAIGQSATIEIELATGG 75

Query: 76  VQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEIL-SILLQEM 134
            + ++G V +F         + Y   +   L  ++ R++S+I+Q QTV +++  +L +  
Sbjct: 76  SRYINGHVLSFGNNGSDGGMSRYSAYIGSWLSLIAQRYDSQIYQDQTVEQVIRKVLGRYD 135

Query: 135 GIHDYAFALKRDCVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASDS 194
           G+  Y F + R      +  QYRESD  F+ RL  +EGL + F H A  HTL   D S  
Sbjct: 136 GLAKYEFRVNRTLKPYSYITQYRESDSHFVMRLLEQEGLFFYFEHTADSHTLIIMDDSTV 195

Query: 195 LSKLPE-PIPYNALAGGTMDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQGTE 253
           L+ LPE P      A  T  +  I   +   + +  ++ ++ + +++P      T+    
Sbjct: 196 LTPLPEQPQVRFHTASVTETSDSITHWSSAREFQAGKISVQTFDYRQPGNRIPVTMNSLN 255

Query: 254 LDYQQTRYQHFDAPGRYKDDV--NGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYKFDL 311
                  Y+ FD  G+Y      +G    + R++ L     T  G SN   +R GY F+L
Sbjct: 256 QQGDVPSYEIFDYMGQYTHGTPEDGELLVRNRIEALELKGKTFVGSSNCRAMRPGYTFEL 315

Query: 312 QEHLDPAM----NRDWVVVSINHQGEQPQALQEEGGSGATTYNNQFSLIPGHLHWRAEPQ 367
            +H +       +R +++++I H+G        + G     Y N+   +   + +R +  
Sbjct: 316 TQHYEHDTGSPDDRQFLLMNIEHRGSNNYTSGSQAG-----YANKIYCVRKKIKFRPQMD 370

Query: 368 P-KPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWAGSQ 426
             KP + GP  A VVGP GEEI+ DE GRVK+ F WDRY   +++SSCWVRV+Q  A   
Sbjct: 371 LLKPGISGPQTAIVVGPPGEEIYTDEMGRVKVQFHWDRYGKFDDKSSCWVRVAQSGASGG 430

Query: 427 YGFIAIPRIGHEVIVSFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQGEG 486
           +G + IPR+G EV+V FL+G+PD+P++ G  Y++ NTPP++LP +KT++   T + +G+G
Sbjct: 431 FGSMQIPRVGDEVVVVFLDGNPDRPLVMGSLYNSQNTPPWSLPANKTQSGFLTRSAKGDG 490

Query: 487 --FNELSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDQHLTVENDQFTQIKHNQHLT 544
              N   FED+AG EQ+ +HA+++ D  IE D       ++H         ++ +N+ +T
Sbjct: 491 GTANFFRFEDKAGAEQVIMHAERNMDTEIELD-------EKH---------EVGNNRKVT 534

Query: 545 VEGESRTLVKLDCSSEI-GGSLQQKIGSKAI-YDAGTEVHLKAGNKLVLEAGNELTIKAG 602
           V G +  +++ D  + +  GS   K+ ++ I  DA   + LK G+  +      + IK  
Sbjct: 535 VGGTNTEIIQKDTVTNVQQGSFTLKVDNQFIQVDAKQYILLKVGDSSISITPEGIQIK-- 592

Query: 603 GSFIKVDAGGVHVVGSAINLN 623
           G  I V      V G  +++N
Sbjct: 593 GKVINVLGESTFVKGDRVDIN 613