Pairwise Alignments

Query, 694 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 941 a.a., Rhs element Vgr protein from Dechlorosoma suillum PS

 Score =  204 bits (518), Expect = 2e-56
 Identities = 164/564 (29%), Positives = 262/564 (46%), Gaps = 74/564 (13%)

Query: 8   IEVEGLEDETLVVRGFHGQESLSNSVFLGQACYGFRYQMQLASRVSNLTADQMVDKRAEL 67
           + V G+  E L+     G+ES+S           +R ++   S  ++L   Q++ + AEL
Sbjct: 27  LRVLGVGSEELLPVEARGEESVSGD---------YRVEVGCLSPDTHLELKQLIGRIAEL 77

Query: 68  KLYRNSQLVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEIL 127
            L       + + G++            + + L +VP L  L+ R NSR+FQ ++VPEI+
Sbjct: 78  NLLLADGGHKTISGLIAEARHEGADGGFSRFALVIVPGLSLLTHRTNSRVFQDKSVPEIV 137

Query: 128 SILLQEMGIHDYAFA--------LKRDCVQREFCVQYRESDIDFLHRLAAEEGLV--YSF 177
             LL E       +A        L +D  QR +C+QYRESD DF+ RL AEEG+   Y F
Sbjct: 138 HTLLSEHRDAGGPWAAACRWQNRLAKDYPQRSYCLQYRESDRDFIRRLLAEEGIATRYEF 197

Query: 178 VHEAGK----------HTL-YFSDASDSLSKLPEPIPYN-ALAGGTMDTPYIHGLTYRTQ 225
             E             HTL  F D  +      E I ++ A A    D+        R +
Sbjct: 198 QEEDSSGQRQDDATPLHTLVLFDDPYEPTPAQQEKIRFHRADASEEADSLTAWDTARRLR 257

Query: 226 AEVSEVQLKDYSFKKPAYSFL--QTVQGTELDYQQTRYQHFDAPGRY--KDDVNGAAFSQ 281
           +  S++   DY    P  +     T QG +    ++R + +D    Y   D+ + + ++Q
Sbjct: 258 SGKSQLLAWDYKPVTPLQADAPGTTDQGEQGGQVESRLEAYDPQAHYYGADNDDLSRYTQ 317

Query: 282 IRLDYLRRHAHTATGQSNEPLLRAGYKFDLQEHL----DPAMNRDWVVVSINHQ------ 331
           +R D   R A    GQS+   L AG  F L++H     +   +R ++V  +N        
Sbjct: 318 LRQDSRDRAAKDYQGQSSVRGLTAGQWFQLEDHPRHEGEDDDSRRFLVRHLNWHARNNLP 377

Query: 332 ---------------GEQPQALQEEGGSGATTYNNQFSLIPGHLHWRAE--PQPKPQVDG 374
                          G+   A    G +G   Y N F+ +        +  P  KP   G
Sbjct: 378 GDLTDGLPGLLASAAGQHGTASDAAGATGDQPYRNTFTAVRRDTPIAPDYAPYQKPTAKG 437

Query: 375 PMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNG-------NEQSSCWVRVSQGWAGSQY 427
           P  ATVVGP+GEEI  D+ GR+KI F W R  +        +++SSCW+RV+  W G+ +
Sbjct: 438 PQTATVVGPQGEEIHTDDLGRIKIQFHWAREQDHPDGGAALDDRSSCWIRVAVPWGGANW 497

Query: 428 GFIAIPRIGHEVIVSFLNGDPDQPIITGRTYHATNTPPY-----TLPEHKTKTVLRTETH 482
           G   +PRIG EV+V FL GD D+P++    Y+ ++ PP      +LP ++T   ++++ +
Sbjct: 498 GHQYLPRIGQEVLVEFLEGDIDRPVVMAGLYNGSHRPPTYSGAGSLPANRTLAGIKSKEY 557

Query: 483 QGEGFNELSFEDQAGKEQIYLHAQ 506
           +G G+NEL F+D  G+ +  L ++
Sbjct: 558 KGNGYNELLFDDSTGELRAKLSSE 581