Pairwise Alignments

Query, 172 a.a., type VI secretion system tube protein Hcp from Vibrio cholerae E7946 ATCC 55056

Subject, 172 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E3

 Score =  217 bits (552), Expect = 1e-61
 Identities = 103/170 (60%), Positives = 128/170 (75%)

Query: 1   MPTPCYISIEGQTQGLITAGACTADSIGDSFVEGHEDEMLVQQFDHVVTVPTDPQSGQPS 60
           M TP Y+SI G  QGLITAGA TADS+G+++ EGHED+++VQ F+H V +P DPQSGQP+
Sbjct: 1   MATPAYMSITGTKQGLITAGAFTADSVGNTYQEGHEDQVMVQGFNHEVIIPRDPQSGQPT 60

Query: 61  GQRVHKPFKFTVALNKAVPLLYNALSSGEKLKTVELKWYRTSIEGKQENFFTTKLENASI 120
           GQRVHKP K T   +K+ PLL  AL+SGE+L  + ++WYRTS  G QE++FTTKLE+A I
Sbjct: 61  GQRVHKPVKITKVFDKSSPLLLAALTSGERLTEITIQWYRTSAAGTQEHYFTTKLEDAII 120

Query: 121 VDIHCEMPHCQDPAKSDFTQNVTVSLSYRKITWDHVNAGTSGSDDWRKPI 170
           VDI   M +CQDPA S FT    V  +YRKITW H  +GTSGSDDWR P+
Sbjct: 121 VDIKDYMHNCQDPANSHFTHLEDVEFTYRKITWTHEVSGTSGSDDWRSPV 170