Pairwise Alignments

Query, 729 a.a., 1,4-alpha-glucan branching enzyme from Vibrio cholerae E7946 ATCC 55056

Subject, 733 a.a., glycogen debranching enzyme GlgX (RefSeq) from Shewanella loihica PV-4

 Score = 67.0 bits (162), Expect = 3e-15
 Identities = 81/349 (23%), Positives = 133/349 (38%), Gaps = 76/349 (21%)

Query: 138 GVRFLVYAPHAAACSLIGAFNHWDGR--RHPMQRLDYGIWGIFIPGLPEGTQYKFELKGP 195
           GV F +++ HA A  L   F+  D    R  ++R    IW   + GL  G +Y + + GP
Sbjct: 19  GVNFALFSAHATAVYLC-LFDEEDREVARLRLERQSQQIWHGHVSGLRAGCRYGYRVDGP 77

Query: 196 HGEGLPHKADPWGFYAEQYPS-FASVTYDHRRYQWQDTAWQQ------------------ 236
           +   + H+ +      + Y    +    DH+ +       +Q                  
Sbjct: 78  YQPLIGHRFNVNKLLLDPYARRLSGAIKDHKSHYGYQFGHEQEDLSFCELDNAERMPKCV 137

Query: 237 -------RPVT------EKRKQALSF-----YELHVGSWKRGENGEFLNYRE-----LAD 273
                  +P+T      ++    LS      YELHV  + + +N E  + R      L D
Sbjct: 138 VVDLENLKPITPLVNPFDQSDSPLSLRRSVIYELHVKGFSQ-QNPEVASERRGRFAGLGD 196

Query: 274 QL-VPYLVEMGYTHVELMPVAEHP---------FYGSWGYQPVGLFAPTSRY-------- 315
              + +L  +G T VEL+PV +               WGY  +G FAP   Y        
Sbjct: 197 PASLQHLKSLGVTAVELLPVQQFVTEAFLQQKGLTNYWGYNTIGYFAPHQAYLSESISES 256

Query: 316 ---GSPDDFKYFVDLCHQAGIGVVLDWVPAHFPSDSH--------GLANFDGTPLFHDPD 364
              G+ ++F+  V   H AGI V+LD V  H    +         G+ N     L H  +
Sbjct: 257 EGDGAIEEFRDMVSALHGAGIEVILDVVYNHSAEGNRLGPTYSFKGIDNLSYYRL-HPSE 315

Query: 365 PRRGWHQDWNSYIYDLGREHVRRFLVANALYWFEMFHIDGIRVDAVASM 413
           PR   +        +L    V + ++ +  YW E+  +DG R D  +++
Sbjct: 316 PRYYINDTGCGNTLNLSNPRVLQLVMDSLRYWVEVMGVDGFRFDLASTL 364