Pairwise Alignments

Query, 729 a.a., 1,4-alpha-glucan branching enzyme from Vibrio cholerae E7946 ATCC 55056

Subject, 750 a.a., glycogen operon protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 70.9 bits (172), Expect = 2e-16
 Identities = 79/344 (22%), Positives = 125/344 (36%), Gaps = 71/344 (20%)

Query: 138 GVRFLVYAPHAAACSL--IGAFNHWDGRRHPMQRLDYGIWGIFIPGLPEGTQYKFELKGP 195
           GV F +++ HA    L    A    + +R  +      IW +++ GL  G  Y + + GP
Sbjct: 33  GVNFALFSAHATGVELCLFDAQGKVEIQRIALTEQTQQIWHLYVHGLCAGQLYGYRVYGP 92

Query: 196 HGEGLPHKADPWGFYAEQYPSFASVTYDHRRYQW--------QDTAWQQ----------- 236
           +   L H+ +P     + Y       Y H    +        +D ++             
Sbjct: 93  YEPQLGHRFNPHKLLLDPYARQLVGRYHHHIANFGYELDNPNEDLSFSTLDNAAYMPKCK 152

Query: 237 ----------------RPVTEKRK----QALSFYELHVGSWKRGE-------NGEFLNYR 269
                           RP++  R     +    YE+H+  +            G F    
Sbjct: 153 VVDIRPLLAAAESQAIRPLSPHRNPLPIEQCIIYEMHLKGFTALHPEIDVPLRGTFAGLA 212

Query: 270 ELADQLVPYLVEMGYTHVELMPVA---------EHPFYGSWGYQPVGLFAPTSRYGSPDD 320
             A   + YLV++G   VEL+P+          E      WGY  +G FAP   Y S +D
Sbjct: 213 SKA--AIDYLVKLGVNCVELLPIQAFFSEPFLLEKQLSNYWGYNSIGFFAPEPSYLSSED 270

Query: 321 ---FKYFVDLCHQAGIGVVLDWVPAHFPSDS--------HGLANFDGTPLFHDPDPRRGW 369
              F+  VD  H AGI V+LD V  H    S         G+ N     L H  D R   
Sbjct: 271 IIEFRTMVDALHGAGIEVILDVVYNHSAEGSRLGPTFSFRGIDNLSYYRL-HPNDKRFYI 329

Query: 370 HQDWNSYIYDLGREHVRRFLVANALYWFEMFHIDGIRVDAVASM 413
           +        +L    + + ++ +  YW ++  +DG R D  AS+
Sbjct: 330 NDTGCGNTLNLNHPRMLQLVLDSLRYWVKVMGVDGFRFDLAASL 373