Pairwise Alignments

Query, 729 a.a., 1,4-alpha-glucan branching enzyme from Vibrio cholerae E7946 ATCC 55056

Subject, 746 a.a., 1,4-alpha-glucan branching enzyme (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  667 bits (1721), Expect = 0.0
 Identities = 349/729 (47%), Positives = 469/729 (64%), Gaps = 25/729 (3%)

Query: 13  FYD----QLARAAFADPFSFLGPYIPAEQGAL--RVWMPGADNVALVV--EGQARVALER 64
           FYD     L    + D FS LG +   E  AL  R ++  A  V ++   +G+   +LER
Sbjct: 9   FYDGSDVALLNGQYTDVFSLLGMHSINEGKALVVRCFLRNAQKVDVISLKDGRKVASLER 68

Query: 65  EGEGG-FVLKDGRNLRFTHYQLAVDWAGTEQLLDDPYQYHGLYAEYEDLH-----TPKQM 118
             E G F    GR ++   Y L V +   E  + DPYQ+ G     EDL+     + +Q 
Sbjct: 69  VNEAGLFAGTLGRRIKPFLYALRVTYPLCELDIIDPYQF-GSLLNREDLYLFGEGSSEQA 127

Query: 119 YHHMGAQFVTLERDGKMVSGVRFLVYAPHAAACSLIGAFNHWDGRRHPM-QRLDYGIWGI 177
           Y  +GA +  ++     V GV F V+AP+A   S++G FNHWD  RH M Q +  G+W I
Sbjct: 128 YRFLGANWRQVDN----VEGVHFCVWAPNAKRVSVVGDFNHWDDTRHVMRQHVANGLWEI 183

Query: 178 FIPGLPEGTQYKFELKGPHGEGLPHKADPWGFYAEQYPSFASVTYDHRRYQWQDTAWQ-Q 236
           F+PG+ EG+ YKF+L   +GE    K+DP     E  P  AS+    +++QW DT W  +
Sbjct: 184 FLPGVVEGSHYKFDLVYQNGERHA-KSDPMATQMECAPHNASIVPKKQQHQWADTQWMDK 242

Query: 237 RPVTEKRKQALSFYELHVGSWKR-GENGE-FLNYRELADQLVPYLVEMGYTHVELMPVAE 294
           R  T   +  +S YE+ +GSW+R GE GE + +Y++L +QL+PY+ E G+TH+ELMPV+E
Sbjct: 243 RAATAWHRAPMSIYEVQLGSWRRKGEFGEQYFDYQDLIEQLIPYVKEQGFTHIELMPVSE 302

Query: 295 HPFYGSWGYQPVGLFAPTSRYGSPDDFKYFVDLCHQAGIGVVLDWVPAHFPSDSHGLANF 354
           +PF GSWGYQPVGL+APT R+G  + FK F+D CHQA IGV+LDWV AHFP D HGL  F
Sbjct: 303 YPFDGSWGYQPVGLYAPTYRFGDANGFKAFIDACHQAEIGVLLDWVAAHFPKDPHGLVRF 362

Query: 355 DGTPLFHDPDPRRGWHQDWNSYIYDLGREHVRRFLVANALYWFEMFHIDGIRVDAVASML 414
           DGT L+   DPR+G H DW++ IY+ GR  VR FL++NA YW   FH+DG+R+DAV+SML
Sbjct: 363 DGTCLYEHEDPRKGTHPDWDTLIYNYGRGEVRSFLLSNACYWLREFHLDGLRLDAVSSML 422

Query: 415 YLDYSRSHDQWIPNVDGGRENYDAIATFKWMNEEVYKHFPNAMTIAEESTAFPGVSAPTF 474
           YLDYSR   QW+PN  GGREN +AI   + +N+ +Y+  P    IAEESTAF GV+ PT 
Sbjct: 423 YLDYSREPGQWLPNAYGGRENLEAIDFLQMLNQRLYQAIPGICMIAEESTAFAGVTKPTD 482

Query: 475 MGGLGFGFKWNMGWMHDSLSYIKEDPVHRKYHHNTLTFPLIYAFSENYVLSLSHDEVVYG 534
             GLGFGFKWNMGWM+DSLSY+  DP++R+YHHN LTF L+YA+SE ++LS+SHDEVV+G
Sbjct: 483 SSGLGFGFKWNMGWMNDSLSYLGRDPIYRQYHHNQLTFSLMYAYSEQFMLSISHDEVVHG 542

Query: 535 KRSLMYKMPGDEWQQTANLRAYLGYMYGQPGKKLNFMGTELGQTAEWDHDGQLQWFLTQF 594
           K SL++K+PGD+WQ+ A LRAY G+M+G PGKKL FMG+E  Q  EWDHD  L W L  F
Sbjct: 543 KGSLLHKIPGDDWQKFATLRAYYGFMWGHPGKKLLFMGSEFAQRDEWDHDHSLDWHLLAF 602

Query: 595 ERHAGIQRLVRDLNHLYQAQTALHQLDCDPRGFEWRLQDNADLSVIAHERMDEAGNRVLV 654
           E H G+QR +RDLN LY+   AL  LD +P+GF W   DN   S+ +  R  E  +  LV
Sbjct: 603 EPHQGVQRWLRDLNQLYRQFPALSVLDYEPQGFRWLDCDNGRDSIFSFVRYGEGNDVPLV 662

Query: 655 -ITNFTPVPQQEFRLGVPKTGKYRLLLNTDAKQYNGSDYPVLQDVSTEAISSEGLDQSLL 713
            + N TP   Q FR+G+P+ G +   LN+D+  Y GS+      +  +A+  +G+  S L
Sbjct: 663 FVVNMTPTVHQGFRIGLPQGGDFCEYLNSDSYLYGGSNQGNGGKIIAQALPWQGMASSAL 722

Query: 714 LSVPPLATL 722
           ++VPPL  L
Sbjct: 723 ITVPPLGCL 731