Pairwise Alignments

Query, 817 a.a., glycogen/starch/alpha-glucan phosphorylase from Vibrio cholerae E7946 ATCC 55056

Subject, 837 a.a., glycogen phosphorylase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  684 bits (1766), Expect = 0.0
 Identities = 361/776 (46%), Positives = 480/776 (61%), Gaps = 4/776 (0%)

Query: 39  YLAMGRALAEFTTFDLLETEQDERILNSKSLNYLSLEFLIGRLTGNNLISMGVYEAVGQA 98
           + A+  ++ E    D  ET   +   ++K + YLSLEFL+GR  GN L+S+ + +   +A
Sbjct: 64  FQALALSVKEQMLDDWRETRIKDSHYDNKQVAYLSLEFLMGRTLGNALLSLDLEQDSREA 123

Query: 99  MEELGQNLSDLLEEERDPSLGNGGLGRLAACFMDSCAAQEYPTVGYGLHYEYGLFKQSFE 158
           +     +L +L E E D  LGNGGLGRLAACF+DSCA+ +    GYG+ YEYG+F Q   
Sbjct: 124 LSHYSVSLEELEEAEHDAGLGNGGLGRLAACFLDSCASLDLSVTGYGIRYEYGMFAQKIV 183

Query: 159 EGRQKEAPDAWCGVEGYPWEVARPELKQEIGFYGHVE-VVNENGKERRRWVPGMLVQAMP 217
           +G Q E PD W   EG PWEV  P     + F+GH E  V++ G+    WV    V A+ 
Sbjct: 184 DGYQVERPDRWLR-EGNPWEVRVPHHNVTVHFFGHTESYVDKQGRRHVIWVDTQDVLAVA 242

Query: 218 WDLPIVGYQSDTVYPLRLWECRAIAPFSLESFNNGNYFEAQHALIDAGNITKVLYPNDNH 277
           +D+P+ GY++  +  LRLW+  A   F L  FN G+Y EA      A  IT VLYPND  
Sbjct: 243 YDMPVPGYRNGRINTLRLWKAEATDDFDLAEFNQGDYTEAVARKNLAEQITMVLYPNDAS 302

Query: 278 EKGKTLRLMQQYFHSAASVRDILRRH-EAAGHALADLPKYETIQLNDTHPTIAIPELMRI 336
           E GK LRL QQYF S+AS++ IL+R     GH          +QLNDTHP+IA+PELMR+
Sbjct: 303 ENGKELRLRQQYFLSSASLQAILKRWVHHHGHDFTQFAAKNVMQLNDTHPSIAVPELMRL 362

Query: 337 LIDEKLMSWEAAWAICSHTFAYTNHTLLPEALETWSESLIQRLLPRHMEIIYEINHRFLQ 396
           L+DE  + W+AAWAI   T AYTNHTLLPEALE W   ++  +LPR +EIIYEIN R+L 
Sbjct: 363 LVDEYALEWDAAWAITRQTMAYTNHTLLPEALERWPVRMMALMLPRILEIIYEINARYLD 422

Query: 397 QVRAKWPGDVAKQQKLSIIEEGFHRMVRMANLCVVGSYAVNGVAALHSELVKRDLFPEFV 456
            V   WPGD  K   +SII+EG    VRMA L +V S++VNGVA LH++L+K  LF +F 
Sbjct: 423 LVAHHWPGDADKLASMSIIQEGPDPHVRMAYLAIVASFSVNGVAGLHTQLLKSGLFKDFY 482

Query: 457 ELYPGKIQNVTNGITPRRWLKFCNPGLSALISEKIGHEWPAKLDQLTKVAQYAEDAAFQK 516
            L+P K  N TNG+TPRRWL  CNP L+ L+S  +G  W   L QL  +    +DA+F +
Sbjct: 483 SLWPQKFNNRTNGVTPRRWLAHCNPALAKLLSSHLGQSWVTDLSQLMALNALTQDASFIQ 542

Query: 517 RFMEVKKANKARLADWVKDHMGIELDTNAIFDVQIKRLHEYKRQHLNMLHILSLYHRLIN 576
           ++ EVK+ NK  LA+ +    G+E D + +FDVQ+KR+HEYKRQ LN+LH++ LYH++  
Sbjct: 543 QWREVKQGNKVLLANMIAKECGVEFDPSMLFDVQVKRIHEYKRQLLNILHVIHLYHQIQQ 602

Query: 577 DPSFDMHPRVVFFAAKAAPGYHLAKEIIYAINMIAQKVNNDPRVGNKLKVVFIPDYRVSM 636
             +  + PR V    KAAPGY +AK II   + +A  VN+DP V   L+  F+P+Y VS 
Sbjct: 603 GHTEHLVPRCVLIGGKAAPGYFMAKLIIKLASNVAHMVNSDPVVAPYLRFAFLPNYNVSA 662

Query: 637 AEIIIPAADVSEQISTAGKEASGTGNMKMALNGALTIGTMDGANVEIREEVGDDNIYIFG 696
            E I P  DVSEQISTAGKEASGTGNMK  +NGALTIGT+DGAN+E+ EEVG+++ ++FG
Sbjct: 663 MEKICPGTDVSEQISTAGKEASGTGNMKFMMNGALTIGTLDGANIEMLEEVGEESFFLFG 722

Query: 697 LEVDGVEALKARGYNPYDFYHADPLLKASLDLLVGEEFTPGAPGKLRATYDSLLDGGDPY 756
           L  + V A+++  Y P         L   + LL    F    PG       S+    D +
Sbjct: 723 LNAEQVAAMRS-NYQPKRIIAQSHALSEVMALLKSGHFNLLEPGIFDPIITSIESSDDQW 781

Query: 757 LVLADFASYVKAHEAIDKQYRDQAGWAKKAILNTALVGKFSSDRSIRDYVNNIWKL 812
           +  ADF SY  A EA+   Y+DQ  W + +I NTA  G+FSSD +I  Y + IWKL
Sbjct: 782 MTAADFDSYRLAQEAVANTYKDQQKWTQMSIRNTAASGRFSSDVTIAGYRDEIWKL 837